Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0138
         (768 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g42620.1 68418.m05188 expressed protein                             36   0.022
At1g16160.1 68414.m01936 protein kinase family protein contains ...    31   1.1  
At2g34940.1 68415.m04289 vacuolar sorting receptor, putative sim...    30   2.0  
At1g19390.1 68414.m02412 wall-associated kinase, putative simila...    29   4.5  
At4g03060.1 68417.m00414 2-oxoglutarate-dependent dioxygenase, p...    28   6.0  
At3g02000.1 68416.m00160 glutaredoxin family protein contains IN...    28   6.0  
At1g16120.1 68414.m01932 wall-associated kinase, putative contai...    28   6.0  

>At5g42620.1 68418.m05188 expressed protein
          Length = 841

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
 Frame = +1

Query: 34  SESC--QCENGGSCSTESTNCICPPGYTGSYCETRIASYLMSPPPPVNPCSLH--PCRNG 201
           + SC   C   G C+T+   CIC  G+TG  C T I             CSLH   C N 
Sbjct: 631 NRSCPNNCNGHGKCTTQGV-CICENGFTGIDCSTAICD---------EQCSLHGGVCDN- 679

Query: 202 GTCKPDRNSWMNHTC 246
           G C+   + +  +TC
Sbjct: 680 GVCEFRCSDYAGYTC 694


>At1g16160.1 68414.m01936 protein kinase family protein contains
           similarity to wall-associated kinase 4 GI:3355308 from
           [Arabidopsis thaliana]
          Length = 711

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 7   TYDRGDIQASESCQCENGGSCSTESTNCICPPGYTGS 117
           TY  G   + +SC CE G        NC C  G+TG+
Sbjct: 254 TYS-GSYLSGDSCLCEYGYFSEMSYRNCYCSLGFTGN 289


>At2g34940.1 68415.m04289 vacuolar sorting receptor, putative
           similar to BP-80 vacuolar sorting receptor [Pisum
           sativum] GI:1737222
          Length = 618

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 14/97 (14%)
 Frame = +1

Query: 22  DIQASESCQCENGGSCSTESTNCI-CPPGYTGSYCETRIASYLMSPPPPVNPCSLH-PCR 195
           DI+ +E C  ENGG    + +N   C   + G  CE  +   +         C  + P R
Sbjct: 410 DIETNE-CLIENGGCWQDKRSNVTACKDTFRGRVCECPVVDGVQYKGDGYTSCKPYGPAR 468

Query: 196 ---NGGTCKPDRNSWMNHT---------CDCPLGYAG 270
              N G C  +    +  +         C CPLG+ G
Sbjct: 469 CSMNNGDCWSETRKGLTFSSCSDSETSGCRCPLGFLG 505


>At1g19390.1 68414.m02412 wall-associated kinase, putative similar
           to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol.
           Biol. 39 (6), 1189-1196 (1999))
          Length = 788

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 22  DIQASESCQCENGGSCSTESTNCICPPGYTGS 117
           +I+   SC C N     T+  NC C  GY G+
Sbjct: 299 NIKLVTSCICNNVTISGTDYANCGCSQGYEGN 330


>At4g03060.1 68417.m00414 2-oxoglutarate-dependent dioxygenase,
           putative (AOP2) nearly identical to GI:16118891;
           contains Pfam profile PF03171: 2OG-Fe(II) oxygenase
           superfamily domain.  The gene sequence is frameshifted,
           this could be a pseudogene or a sequencing error may
           exist; identical to cDNA AOP2 GI:16118890
          Length = 259

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
 Frame = +1

Query: 541 VVDVPINDGERHQVAARLHEDGHAWLSVD-GVDKSAPA-TGISNVMNADSNIYIGG 702
           +V V  N G +  V A + +D +A  SV+ GV  +  A TG+++ +N D+N+ +GG
Sbjct: 30  IVGVEPNVGVK--VNADISDDVNANASVNAGVGANVNADTGVNDNLNVDANVAVGG 83


>At3g02000.1 68416.m00160 glutaredoxin family protein contains
           INTERPRO Domain IPR002109, Glutaredoxin
           (thioltransferase)
          Length = 136

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +1

Query: 304 SVGFNGNGYVELPASLLRYDELASNPAVIALAVHT 408
           S+GF G G V     LLR + LAS  AV+  +V T
Sbjct: 15  SLGFGGLGMVA-DTGLLRIESLASESAVVIFSVST 48


>At1g16120.1 68414.m01932 wall-associated kinase, putative contains
           similarity to wall-associated kinase 4 GI:3355308 from
           [Arabidopsis thaliana]
          Length = 730

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 4   NTYDRGDIQASESCQCENGGSCSTESTNCICPPGYTGS 117
           N   +G   + ++C CE          NC C  GYTG+
Sbjct: 269 NMSRKGSGFSDDNCSCEYDYFSGMSYRNCYCDYGYTGN 306


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.317    0.137    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,349,377
Number of Sequences: 28952
Number of extensions: 430499
Number of successful extensions: 1384
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)