Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0135
         (663 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   6.0  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   7.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.9  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 265 WSLQMKIYPIYNKN*VNMLINNYYTSLSSQNL 360
           +SL    YP +N+  V+  + N    LSS  L
Sbjct: 369 FSLNEDFYPTFNQTNVDQYLYNQTGPLSSTGL 400


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 66  TMKMFNSCRITKNE 107
           T K+FN C+  +NE
Sbjct: 92  TKKLFNKCKSIQNE 105


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 82  THAESPKTNYF 114
           T  E+PKTN+F
Sbjct: 409 TRCENPKTNFF 419


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,846
Number of Sequences: 438
Number of extensions: 2856
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)