Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0133
         (693 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0594 + 25349612-25352530                                         28   6.1  
11_06_0567 - 25038537-25038957,25039059-25039252                       28   8.1  
01_06_0495 - 29779499-29781325                                         28   8.1  

>11_06_0594 + 25349612-25352530
          Length = 972

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 247 AICFCLSVHFAQWVSKASGILSLIF 321
           ++CFC  +H + W+S A  +L+  +
Sbjct: 426 SLCFCSPLHLSSWLSNAEKMLTFCY 450


>11_06_0567 - 25038537-25038957,25039059-25039252
          Length = 204

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 232 CASCFAICFCLSVHFAQWVSKASGILSLI 318
           C +  A  FC  VH A +VS A+G+  L+
Sbjct: 135 CTTAAAGNFCNQVHIAMYVSLAAGVALLV 163


>01_06_0495 - 29779499-29781325
          Length = 608

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -2

Query: 317 IKDKIP-EALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDEFITFYDPQGKYQTSFKDF 141
           +KD IP   L T  +K  D  K  A++L  G+ +     W+  I  Y   G+YQ + + F
Sbjct: 148 VKDPIPMNCLITGYSKSGDVVK--ARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLF 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,283,453
Number of Sequences: 37544
Number of extensions: 275799
Number of successful extensions: 594
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)