Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0133
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ...    32   0.45 
Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U41624-4|AAF99945.1|  322|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AL032657-9|CAA21736.1|  829|Caenorhabditis elegans Hypothetical ...    28   5.5  
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe...    28   7.3  
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe...    28   7.3  
AF039716-3|AAB96736.1|  515|Caenorhabditis elegans Hypothetical ...    28   7.3  
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty...    28   7.3  
U41543-8|AAB37025.2|  393|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
            potassium channelsprotein 2 protein.
          Length = 1564

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -2

Query: 386  ERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKK 219
            E + K   KC  N   C   ++K+  K  + ++  C KC    K+ AK + +  KK
Sbjct: 1265 ENVQKMCKKCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKK 1320


>Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3b protein.
          Length = 871

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -2

Query: 347 QGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDE 195
           + P T +++  KD +    E HC +C   Q    +  +  I+K + +LW E
Sbjct: 679 ENPKTDDIQS-KDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCE 728


>Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3a protein.
          Length = 867

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = -2

Query: 347 QGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQLAQGIKKTHPELWDE 195
           + P T +++  KD +    E HC +C   Q    +  +  I+K + +LW E
Sbjct: 676 ENPKTDDIQS-KDDVTSKSELHCYRCEHYQLPAEEVSSHNIRKDNGDLWCE 725


>U41624-4|AAF99945.1|  322|Caenorhabditis elegans Hypothetical
           protein F46C8.7 protein.
          Length = 322

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -1

Query: 222 EDTPGVMGRVHYFLRPSRKISNFFQRFS*VL 130
           E+ P V+GR H  L+P     N++++F  V+
Sbjct: 155 ENDPRVIGRAHSILKPYGLAGNYWEKFGEVM 185


>AL032657-9|CAA21736.1|  829|Caenorhabditis elegans Hypothetical
           protein Y47H9C.9 protein.
          Length = 829

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -2

Query: 389 NERLLKSYTKCLLNQGPCTAELKKIKDKIPEALETHCAKCTDKQKQMAKQL 237
           NE+L +  +   L +     +LKKI+DK+         K  DK K + ++L
Sbjct: 20  NEKLTRDVSDAKLLKEDAEIKLKKIRDKLNGEHSEKLGKLNDKYKAVQEEL 70


>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying
           defective protein 19,isoform a protein.
          Length = 1783

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
 Frame = +3

Query: 108 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 260
           L++  +Y  L K    S++ S   LR+ K  +    LR     LLNSLR +   LLL   
Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609

Query: 261 FISTFRTMGLQSF-WNFIFN 317
           FI  F  +G+Q F   F FN
Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629


>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying
           defective protein 19,isoform b protein.
          Length = 1877

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
 Frame = +3

Query: 108 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 260
           L++  +Y  L K    S++ S   LR+ K  +    LR     LLNSLR +   LLL   
Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609

Query: 261 FISTFRTMGLQSF-WNFIFN 317
           FI  F  +G+Q F   F FN
Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629


>AF039716-3|AAB96736.1|  515|Caenorhabditis elegans Hypothetical
           protein W03G9.2 protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
 Frame = +1

Query: 352 SKHLVYDLRSLSLLKTSEASKLSSIGSYLS*ASTAKNRPRKTNSSFILKFSTRFPST-SN 528
           +   V + R L  + T     LS  G +++  +    RP +TN  F +  +    +T SN
Sbjct: 136 TSQFVREHRQLGFIPTPSRRSLSCTGRFMNFETKCDERPDRTNPEFSVGNNNFLSATISN 195

Query: 529 QDCS*FTDKNLSH 567
            D    T  N  H
Sbjct: 196 LDEDFKTPSNCEH 208


>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
           calcium channelalpha 1 subunit protein.
          Length = 1783

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
 Frame = +3

Query: 108 LKYCFIYLRLKKIFERSLIFS---LRVVKSNELVP*LR---VCLLNSLRKLFRHLLL--- 260
           L++  +Y  L K    S++ S   LR+ K  +    LR     LLNSLR +   LLL   
Sbjct: 550 LEFVLVYFDLMKPLGVSVLRSARLLRIFKVTKYWTSLRNLVSSLLNSLRSIISLLLLLFL 609

Query: 261 FISTFRTMGLQSF-WNFIFN 317
           FI  F  +G+Q F   F FN
Sbjct: 610 FIVIFALLGMQVFGGKFNFN 629


>U41543-8|AAB37025.2|  393|Caenorhabditis elegans Hypothetical
           protein F46H5.8 protein.
          Length = 393

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -1

Query: 549 RKLRAVLIA-CTRKSCAKFQYETAIGFSWPILSRTGSRQI 433
           + + AV++A C  K+     YET I   WP  S  G   I
Sbjct: 74  KSISAVILAYCIDKNKEGINYETKISEIWPDFSNNGKENI 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,368,196
Number of Sequences: 27780
Number of extensions: 290774
Number of successful extensions: 916
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)