Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0131
(762 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_15628| Best HMM Match : p450 (HMM E-Value=1.20512e-43) 43 2e-04
SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05) 43 2e-04
SB_6244| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_51609| Best HMM Match : p450 (HMM E-Value=0) 42 5e-04
SB_15630| Best HMM Match : p450 (HMM E-Value=0) 41 0.001
SB_21442| Best HMM Match : p450 (HMM E-Value=0) 40 0.002
SB_1738| Best HMM Match : p450 (HMM E-Value=0) 40 0.003
SB_51175| Best HMM Match : p450 (HMM E-Value=0) 39 0.004
SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_2334| Best HMM Match : p450 (HMM E-Value=0) 39 0.004
SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_22117| Best HMM Match : p450 (HMM E-Value=1.1e-09) 35 0.083
SB_57069| Best HMM Match : GETHR (HMM E-Value=1.7e-10) 31 0.77
SB_588| Best HMM Match : p450 (HMM E-Value=0.17) 30 1.8
SB_56127| Best HMM Match : p450 (HMM E-Value=2.3e-07) 30 1.8
SB_51668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 30 2.4
SB_1809| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_42553| Best HMM Match : VLPT (HMM E-Value=1) 29 3.1
SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_35141| Best HMM Match : p450 (HMM E-Value=0) 29 5.5
SB_8405| Best HMM Match : PAN (HMM E-Value=0.044) 29 5.5
SB_6340| Best HMM Match : EMI (HMM E-Value=0.00055) 29 5.5
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 29 5.5
SB_58979| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011) 28 9.5
SB_8320| Best HMM Match : p450 (HMM E-Value=0) 28 9.5
>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +2
Query: 413 YIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDK 592
+ D+ + +P L + L I G++W+ R ++PTF + +KS + L N ++ K
Sbjct: 120 FYDRPVPFELPEP-LDSFLSIVRGERWKRIRNTLSPTFTAHNMKSMVPLINVPCDTLMKK 178
Query: 593 LKKEA---SNFDCHDYMSECTVEILLETAMGVSKSTQ 694
++K A FD Y TVEI+L G+ Q
Sbjct: 179 IEKAAETGETFDIVKYQQAVTVEIILSIVFGIQSDCQ 215
>SB_15628| Best HMM Match : p450 (HMM E-Value=1.20512e-43)
Length = 440
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +2
Query: 485 QKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEA---SNFDCHDYMSECTVEI 655
+KW R ++P F + +K + L N++ +++KL K A +F H + T++
Sbjct: 139 EKWHRIRNTLSPAFSAHKMKLMVPLINSSCDVLINKLTKVAESGESFFTHKFHQGLTMDT 198
Query: 656 LLETAMGVSKSTQ 694
+L+TA G+ Q
Sbjct: 199 ILKTAFGIQSEAQ 211
>SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05)
Length = 278
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 443 FKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDC 622
F P L L +G++WR+ R ++P F + LKS + L N ++K+ + A
Sbjct: 16 FSPPLDKMLNALSGEEWRNLRHTLSPNFSAHKLKSMVPLMNKACDVYMEKITRAAETRAT 75
Query: 623 HDYMS---ECTVEILLETAMGVSKSTQD 697
D M T++I++ A GV Q+
Sbjct: 76 IDVMKINPALTLDIIISCAFGVESDCQN 103
>SB_6244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +2
Query: 437 RFFKPWLGNGLLIS-TGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVD--KLKKEA 607
RFF+ LG L+ +G W+ HR+LI+P F + D+ N +R ++D +L++
Sbjct: 97 RFFQNVLGQFSLVGLSGDLWKKHRRLISPFFGRTYMTFASDIANQQTRKLIDRWRLQQPG 156
Query: 608 SNFDCHDYMSECTVEILLETAMGVSKSTQDQSGFEYAMAVMKMCD 742
S + + TV+I G Q+ A+ D
Sbjct: 157 SVIEAFSAVKNLTVDISGLVGFGYDLKVQENPDSTTCRAINAFLD 201
>SB_51609| Best HMM Match : p450 (HMM E-Value=0)
Length = 526
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +2
Query: 443 FKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDC 622
F P L L I G++WR+ R ++P F + LK + L N + K+ A +
Sbjct: 139 FSPPLDKMLTILPGEEWRNLRHALSPNFSAHKLKGMVPLMNKACDVYMKKIACAAETGET 198
Query: 623 HDYMS---ECTVEILLETAMGVSKSTQD 697
D M T++I++ A GV Q+
Sbjct: 199 IDVMKINPALTLDIIISCAFGVESDCQN 226
>SB_15630| Best HMM Match : p450 (HMM E-Value=0)
Length = 965
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +2
Query: 488 KWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEA---SNFDCHDYMSECTVEIL 658
KW R ++P F + +K + L N++ +++KL K A ++F H + T++ +
Sbjct: 140 KWHRIRTSLSPAFSAHKMKLMVPLINSSCDVLINKLTKIADSGTSFFVHKFHQGLTMDTI 199
Query: 659 LETAMGVSKSTQ 694
L+TA G+ Q
Sbjct: 200 LKTAFGIHSEAQ 211
>SB_21442| Best HMM Match : p450 (HMM E-Value=0)
Length = 565
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 449 PWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLK---KEASNFD 619
P L + + ++ KW+ RK+IAP F + LK + L + + KL+ + + +
Sbjct: 121 PPLDSEMFLAKYPKWKRVRKVIAPAFSGSKLKGTVGLIEGAAERMNAKLESYSQTGESVE 180
Query: 620 CHDYMSECTVEILLETAMGVSKS 688
D S C ++++L +A GV S
Sbjct: 181 MTDLFSLCILDVILSSAFGVDTS 203
>SB_1738| Best HMM Match : p450 (HMM E-Value=0)
Length = 484
Score = 39.5 bits (88), Expect = 0.003
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Frame = +2
Query: 329 VVKIWIGPRLLVFLYDPRDVE--VILSSHVYIDKAEEYRFFKPW--LGNGLLISTGQKWR 496
V K++IG + + DP V+ VI H + ++ F KP + +G+ + G W+
Sbjct: 65 VHKMFIGRAAAIVVSDPEIVKQIVIKEFHKFPNRP---LFIKPNPPMDSGMFLGQGALWK 121
Query: 497 SHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEAS---NFDCHDYMSECTVEILLET 667
R + PTF LK + + + + + K+ A+ + DC + S ++++ +
Sbjct: 122 RIRTTLTPTFSTAKLKQIVPIIDKATATLQSKMASFAATGESTDCVNLFSLFALDVITIS 181
Query: 668 AMGVSKSTQ-DQSGFEYAMA 724
A GV Q D Y +A
Sbjct: 182 AFGVETDIQTDPDSSFYKLA 201
>SB_51175| Best HMM Match : p450 (HMM E-Value=0)
Length = 408
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 491 WRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLK---KEASNFD-CHDYMSECTVEIL 658
WR R + PTF LK + L + + R +V++L K+ + D C Y+ + T+E +
Sbjct: 40 WRRLRHFVTPTFSAVKLKQVVPLISESCRILVEQLGQACKDGKSVDVCRTYV-KFTMETI 98
Query: 659 LETAMGVSKSTQ 694
+ TA G+ TQ
Sbjct: 99 VSTAFGIDCQTQ 110
>SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +2
Query: 491 WRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLK---KEASNFD-CHDYMSECTVEIL 658
WR R ++ PTF +K + L + + R +V++L K+ + D C Y+ + T+E +
Sbjct: 40 WRRLRHIVTPTFSAVKIKQVVPLISESCRILVEQLGQACKDGKSVDVCRTYV-KFTMETI 98
Query: 659 LETAMGVSKSTQ 694
+ TA G+ TQ
Sbjct: 99 VSTAFGIDCQTQ 110
>SB_2334| Best HMM Match : p450 (HMM E-Value=0)
Length = 498
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 461 NGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHDYM-- 634
+G+ +T W+ R + PTF L+ + ++DK+ K A + D +
Sbjct: 125 HGMFSATDDNWKRIRSTLTPTFTSGKLRQMTPKMRESCDTLMDKIGKVADTGESVDILGM 184
Query: 635 -SECTVEILLETAMGVSKSTQ 694
S ++EI+L TA G+ Q
Sbjct: 185 FSPMSLEIILSTAFGIDSQVQ 205
>SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 36.3 bits (80), Expect = 0.027
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Frame = +2
Query: 329 VVKIWIGPRLLVFLYDPRDVEVILSSHVYIDKAEEYR-----FFKPWLGNGLLISTGQK- 490
++ W +VF+ P V+ +L ++ Y + + G G+L
Sbjct: 79 IIVFWAFHNPVVFVVSPEMVKKVLVTYDLPKSTRVYEKLQFVYNQRCTGRGILTEPDPSA 138
Query: 491 WRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKL---KKEASNFDCHDYMSECTVEILL 661
W R L+ P FH L + + FN ++DKL + D D +S T++++
Sbjct: 139 WHKKRTLLNPAFHRKNLMNLMSPFNVICERMIDKLSLISDGKTQVDLADELSRTTLDVIG 198
Query: 662 ETAMGV 679
+ A +
Sbjct: 199 KVAFDI 204
>SB_22117| Best HMM Match : p450 (HMM E-Value=1.1e-09)
Length = 307
Score = 34.7 bits (76), Expect = 0.083
Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +2
Query: 467 LLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASN---FDCHDYMS 637
+ + G+ W R ++P F + +K + L N + ++ KL++ A F+ +
Sbjct: 2 MFFAEGETWHRVRTTVSPIFSAHKMKMVLPLMNNSCDIMMSKLQQAAEKGEPFNMYRMGQ 61
Query: 638 ECTVEILLETAMGVSKSTQ 694
T++ +L G+ S Q
Sbjct: 62 SLTMDFILRIVFGIESSVQ 80
>SB_57069| Best HMM Match : GETHR (HMM E-Value=1.7e-10)
Length = 547
Score = 31.5 bits (68), Expect = 0.77
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 347 GPRLLVFLYDPRDVEVILSSHVYIDKAEEYRFF-KPWLGNGLLISTGQKWRSHRKLIAPT 523
G + V + DP ++ IL + + F K + GL S + W+ R + PT
Sbjct: 86 GKNVEVIVADPDMLKQILVKEFSSFRNRHFAFPPKGLIRLGLFASKDEDWKRVRSTLTPT 145
Query: 524 FHLNVLKSFIDLFNANSRAVVDKLKKEA 607
F +K+ I L + + ++ KL + A
Sbjct: 146 FTSGKMKTMIPLVSKSCDTLIQKLGEVA 173
>SB_588| Best HMM Match : p450 (HMM E-Value=0.17)
Length = 304
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +2
Query: 491 WRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASN---FDCHDYMSECTVEILL 661
W+ R +++P FH K + +FNA + KL+ AS+ D + S T++++
Sbjct: 139 WKRKRGMLSPAFHRLWFKDSMGMFNAVCDKFLVKLEGYASSGEAVDLSEMFSRVTMDVIG 198
Query: 662 ETAMGVSKSTQDQSGFEYAMA 724
+ D E+ A
Sbjct: 199 KVGFNNDLRATDNDKCEFRAA 219
>SB_56127| Best HMM Match : p450 (HMM E-Value=2.3e-07)
Length = 259
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 662 ETAMGVSKSTQDQSGFEYAMAVMKMCDILHLR 757
ETAMGV+ + Q S EY V++M +++ R
Sbjct: 56 ETAMGVNINAQKNSSSEYVKGVIRMSELIQSR 87
>SB_51668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 475 DKKTVSEPWFEETVFLSFIDVNVTTQ 398
D T+++PW T+ F+D+N TQ
Sbjct: 44 DTYTITQPWISYTITQPFLDINTITQ 69
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 514 DKFTMRPPFLTSTDKKTVSEPWFEETVFLSFIDVNVTTQ 398
D +T+ P+++ T ++ PW T+ F+D+N TQ
Sbjct: 116 DTYTITQPWISYT----ITHPWISYTISQPFLDINTITQ 150
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 225 LQDFRYSGTPWNSS-VDLLTSSE-T*FRKALTTITNPSLRSG*DLVSSSFCTILATWKSS 398
L+ + Y+G N + DL S+ + KAL IT+ D+ S I T S
Sbjct: 2015 LRGWTYTGEALNQARADLFAKSKRSNVAKALIMITDGYSNDAVDVPSKKLRDIGVTVLSV 2074
Query: 399 *VVTFTSIKLRNTVSSNHGSETVF 470
V SIK NT++++ SE VF
Sbjct: 2075 GVGKHVSIKQLNTIATDPDSENVF 2098
>SB_1809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +2
Query: 434 YRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEA 607
+R + + +G+ +T KW+ R + PTF L+ + ++DK+ K A
Sbjct: 15 FRDTRSEMRHGMFSATDDKWKRIRSTLTPTFTSGKLRQMTPKMRESCDTLMDKIGKVA 72
>SB_42553| Best HMM Match : VLPT (HMM E-Value=1)
Length = 399
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 473 ISTGQKWRSHRKLIAPTFHLNVLK 544
I TG KWR HR L+ H LK
Sbjct: 322 IVTGDKWRDHRHLLPQELHWKFLK 345
>SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -3
Query: 493 PFLTSTDKKTVSEPWFEETVFLSF-IDVNVTTQDDFHVARIVQKDEETRSYPDLNDGF 323
PFL TDK SE + +E LS N F+V KD +TR PD ++ F
Sbjct: 255 PFLDITDKVLTSENYADERGLLSIEFHPNYVRNGKFYVYYSTFKDNKTR--PDNDEPF 310
>SB_35141| Best HMM Match : p450 (HMM E-Value=0)
Length = 565
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 461 NGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEA 607
+G+ +T KW+ R + PTF L+ + ++DK+ K A
Sbjct: 125 HGMFSATDDKWKRIRSTLTPTFTSGKLRQMNPKIRESCDTLMDKIGKVA 173
>SB_8405| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 387
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 165 TPTGECQGGGCMSLLTN*MGLQDFRYSGTPWNSSVDLLT 281
T G C GGG ++ Q F YS WNS + T
Sbjct: 168 TDLGSCGGGGWTLVMKIDGNKQTFSYSSPKWNSMAEYQT 206
>SB_6340| Best HMM Match : EMI (HMM E-Value=0.00055)
Length = 591
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = +2
Query: 476 STGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHDYMSECTVEI 655
S G KW R+ + P F + +A +D L+K+ DC ++ + T +
Sbjct: 411 SNGVKWSELRRRLNPQFDWEKMLQVAASRSAPVSMALDHLEKQQPLVDCGGFLWKMT-GL 469
Query: 656 LLETAMGVSKSTQDQSGFEYAMAV 727
L +G+ K D++ A+
Sbjct: 470 LPTNKIGLPKLVDDKAYMHQLFAI 493
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 626 DYMSECTVEILLETAMGVSKSTQDQSGF 709
D +S CT++ L + A G+S S QSG+
Sbjct: 1745 DRVSRCTLDGLFKQATGISSSATRQSGY 1772
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 626 DYMSECTVEILLETAMGVSKSTQDQSGF 709
D +S CT++ L + A+G+S S Q G+
Sbjct: 1609 DRVSRCTLDGLFKQAIGISSSATGQPGY 1636
>SB_58979| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 62 LNMSYTNAENVVPTSTFSAINLFYVLLVPAVILWYAYWRMSRRRL--YELADKLN 220
+ +S+T+ + +A+ LF LV +I+ ++ W++SR R+ YE + K++
Sbjct: 160 VGLSFTSYSTIFGFIGVTAVLLFVFGLVMYIIVQHSLWKLSRPRVNPYENSTKIS 214
>SB_56517| Best HMM Match : CUB (HMM E-Value=0.0011)
Length = 734
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 760 VSQVKYIAHFHNGHSIFESALILCTLAHTHS-SFQ*NFNRALAHVVMAIKITSFLFKFVH 584
+S + I H H+ HS + CTL HTHS S +F L H SF +H
Sbjct: 372 LSFTRTIIHTHS-HS-HHALSFTCTLIHTHSHSLALSFTSTLIHTHSHSHALSFTRTIIH 429
Query: 583 NSS 575
S
Sbjct: 430 MHS 432
>SB_8320| Best HMM Match : p450 (HMM E-Value=0)
Length = 1207
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +2
Query: 359 LVFLYDPRDVEVILSSHVYIDKA------EEYRFFKPWLGNGLLISTGQKWRSHRKLIA 517
+V + DP DV+++L S K ++YR + + GL + G++W HR +++
Sbjct: 782 VVSISDPDDVQMVLRSESKFPKRSLLPLIDQYRQLRQ-VPPGLAFAVGEEWYKHRTVLS 839
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,837,733
Number of Sequences: 59808
Number of extensions: 464327
Number of successful extensions: 1179
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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