Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0129
(439 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48526| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_30684| Best HMM Match : 7tm_1 (HMM E-Value=9.3e-11) 29 1.7
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10) 28 3.9
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 27 5.1
SB_38342| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_2430| Best HMM Match : 7tm_1 (HMM E-Value=1e-06) 27 6.8
SB_33670| Best HMM Match : DUF710 (HMM E-Value=3.5) 27 8.9
SB_24419| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_786| Best HMM Match : EGF (HMM E-Value=0) 27 8.9
>SB_48526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 88 PDSMATITMKPEYPPSEVYSTSEPPPAYRHRVS 186
PD AT + PEY + +PPP Y ++
Sbjct: 28 PDMPATFQIPPEYTVEDPIKIDQPPPPYMDTIT 60
>SB_30684| Best HMM Match : 7tm_1 (HMM E-Value=9.3e-11)
Length = 540
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 106 ITMKPEYPPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASSWV 276
I+ K P E STS YR+RV ++++AK A V+ F L T ++W+
Sbjct: 360 ISSKNRIPVDETSSTSRGGVGYRNRVE-NIKVAKTVAAIVL--MFALCTAPFQTAWI 413
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 76 KEHQPDSMATITMKPEYPPSEVYSTSEPPPAYRHRVSTSVQ 198
+ H P S + T +P PP +T++ PPAY R S ++Q
Sbjct: 91 RPHTPPSCQSNTPRPLTPPPRQSNTTQ-PPAYPPRQSYALQ 130
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +1
Query: 118 PEYPPSEVYSTSEPPPAYRHRVSTSVQIAKI---AALTVVASSFILGTFILASS 270
P PP +PPPA H + + I + + ++ FI G+F L+SS
Sbjct: 92 PAPPPPPAQPAPQPPPAPPHFLPFIIIITTVIITIVINIIIIRFISGSFRLSSS 145
>SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10)
Length = 1029
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 64 VVMEKEHQPDSMATITMKPEYPPSEVYSTSEPPPAYRHRVSTSVQIA 204
V++ + P +I +PE P + ++S PP +V++S Q +
Sbjct: 514 VMLSTQQMPSPNTSIKQEPESPNTCIFSQQPPPQPAIKKVASSPQFS 560
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +1
Query: 271 WVAARSSCHQLEQLDAMLDK------ELALEGRAYGNDALVADEPLPLANAHALHGVPTM 432
W ARS+ + E+LD + +K +L LEG G +PL N + + + M
Sbjct: 336 WCNARSNAKEREELDRLFEKYVPASVDLILEGILDGKQGKKLKTIIPLTNLNMVEQLSHM 395
Query: 433 L 435
L
Sbjct: 396 L 396
>SB_38342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.5 bits (58), Expect = 5.1
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 118 PEYPPSEVYSTSEPPPAY 171
P++PP + Y T +PP Y
Sbjct: 29 PQHPPQQFYPTQQPPAQY 46
>SB_2430| Best HMM Match : 7tm_1 (HMM E-Value=1e-06)
Length = 439
Score = 27.1 bits (57), Expect = 6.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 150 CAVYFRRRIFRLHSY 106
CA+Y RR+FR H Y
Sbjct: 257 CAIYTSRRLFRAHQY 271
>SB_33670| Best HMM Match : DUF710 (HMM E-Value=3.5)
Length = 237
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 286 SSCHQLEQLDAMLDKELALEGRAYGNDALV 375
SS Q EQLDA K +AL+G D LV
Sbjct: 110 SSVLQNEQLDACKCKFVALDGETLSTDVLV 139
>SB_24419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 286 SSCHQLEQLDAMLDKELALEGRAYGNDALV 375
SS Q EQLDA K +AL+G D LV
Sbjct: 110 SSVLQNEQLDACKCKFVALDGETLSTDVLV 139
>SB_786| Best HMM Match : EGF (HMM E-Value=0)
Length = 1427
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 112 MKPEYPPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASSF 240
++P Y P+ VYS PPP +++ + + L + SF
Sbjct: 854 VQPAYVPNPVYSPGMPPPVRQYQQPSKSSDTIASNLEKILDSF 896
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,753,058
Number of Sequences: 59808
Number of extensions: 286287
Number of successful extensions: 753
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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