Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0129
         (439 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical...    29   1.5  
Z83109-5|CAB05514.1|  161|Caenorhabditis elegans Hypothetical pr...    27   7.9  
L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase prot...    27   7.9  
AL132862-15|CAB60549.1|  703|Caenorhabditis elegans Hypothetical...    27   7.9  

>AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical
           protein Y43F8C.14 protein.
          Length = 709

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 64  VVMEKEHQPDSMATITMKPEY--PPSEVYSTSEPPPAYRHRVSTSV 195
           +V++K   P ++AT T KP    PP      SEPPPA++    +S+
Sbjct: 275 IVVKKLQAPIALATSTPKPAMCRPPKH----SEPPPAFQDSFVSSI 316


>Z83109-5|CAB05514.1|  161|Caenorhabditis elegans Hypothetical
           protein F44G3.10 protein.
          Length = 161

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = -3

Query: 227 TTVSAAIFAIWTEVDTLCR*AGGGSDVLYTSEGGYSGFIVIVAIESGW 84
           T V    F+    +  +C   G G+    T +GG  G +   + E GW
Sbjct: 2   TAVKRLFFSALNLLGGICILIGVGTPAWLTDDGGSVGIVPFYSTEVGW 49


>L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase protein
           1 protein.
          Length = 601

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 56  CLSKFIYCSPLGNAHCV 6
           C S++++C   GN HCV
Sbjct: 393 CGSQYLFCDTRGNPHCV 409


>AL132862-15|CAB60549.1|  703|Caenorhabditis elegans Hypothetical
           protein Y73F8A.21 protein.
          Length = 703

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
 Frame = +1

Query: 82  HQPDSMATITMKPEYPPSEVYST---SEPPPAY 171
           H P   +T+T +P  P S   ST     PPP Y
Sbjct: 563 HLPQCGSTVTQRPTVPSSTTSSTFYNFPPPPGY 595


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,735,573
Number of Sequences: 27780
Number of extensions: 215344
Number of successful extensions: 633
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)