Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0129
         (439 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   1.9  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   5.9  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   5.9  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   5.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   7.9  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   7.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.9  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 1/113 (0%)
 Frame = +1

Query: 88  PDSMATITMKPEYPPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFI-LA 264
           PD M T+T +P+   S+   T+        R      + K+  L  +       T + L 
Sbjct: 31  PDDMRTVTKRPKTKKSQGSRTTHNELEKNRRAHLRNCLEKLKVLVPLGPETSRHTTLGLL 90

Query: 265 SSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHALHGV 423
           +       S  + E+  A+  ++L+ E R              L   H LHG+
Sbjct: 91  TKAKRFIKSLEERERKHAVHKEQLSREQRFLRRRLEQLTNQTGLHGLHGLHGL 143


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 434 SMVGTPCKAWAFASGK 387
           S+VG  C  W F++ K
Sbjct: 71  SLVGNCCVIWIFSTSK 86


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 164 GGGSDVLYTSEGGYSG 117
           G G DVL T E  +SG
Sbjct: 491 GFGKDVLATDERSFSG 506


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 434 SMVGTPCKAWAFASGK 387
           S+VG  C  W F++ K
Sbjct: 71  SLVGNCCVIWIFSTSK 86


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 167 AGGGSDVLYTSEGGYSGFIVIVAIESGWCSFSITT 63
           A GGS V+  + GG  G + I +  S   S  + T
Sbjct: 34  ASGGSIVVGANNGGGGGGLGIASGLSAMLSLVVVT 68


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 406 GHLLVAKAHPLPGHHFRRLCLPKRVLC 326
           GH    +A P PG   ++LC P+   C
Sbjct: 247 GHQGNFRAGPTPGTILKKLC-PQEEAC 272


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 406 GHLLVAKAHPLPGHHFRRLCLPKRVLC 326
           GH    +A P PG   ++LC P+   C
Sbjct: 162 GHQGNFRAGPTPGTILKKLC-PQEEAC 187


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 406 GHLLVAKAHPLPGHHFRRLCLPKRVLC 326
           GH    +A P PG   ++LC P+   C
Sbjct: 481 GHQGNFRAGPTPGTILKKLC-PQEEAC 506


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,007
Number of Sequences: 438
Number of extensions: 2663
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)