Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0129
(439 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62010.1 68416.m06964 expressed protein 31 0.34
At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1 ... 31 0.45
At2g11620.1 68415.m01249 hypothetical protein 31 0.45
At5g46870.1 68418.m05775 RNA recognition motif (RRM)-containing ... 30 0.59
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 29 1.8
At1g44820.1 68414.m05134 aminoacylase, putative / N-acyl-L-amino... 28 2.4
At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family... 27 4.2
At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger) fa... 27 5.5
At3g45800.1 68416.m04957 hypothetical protein 27 5.5
At3g45770.2 68416.m04947 oxidoreductase, zinc-binding dehydrogen... 27 5.5
At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogen... 27 5.5
At3g19070.1 68416.m02422 cell wall protein-related similar to ve... 27 5.5
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 27 5.5
At2g14770.1 68415.m01668 Ulp1 protease family protein similar to... 27 5.5
At1g65480.1 68414.m07429 flowering locus T protein (FT) identica... 27 5.5
At4g25320.1 68417.m03643 DNA-binding protein-related contains Pf... 27 7.3
At4g08880.1 68417.m01464 Ulp1 protease family protein contains P... 27 7.3
At4g03300.1 68417.m00451 Ulp1 protease family protein contains P... 27 7.3
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 27 7.3
At5g54700.1 68418.m06812 ankyrin repeat family protein contains ... 26 9.7
At3g42730.1 68416.m04462 Ulp1 protease family protein contains P... 26 9.7
At3g26020.1 68416.m03241 serine/threonine protein phosphatase 2A... 26 9.7
At1g26240.1 68414.m03201 proline-rich extensin-like family prote... 26 9.7
At1g25886.1 68414.m03180 Ulp1 protease family protein contains P... 26 9.7
>At3g62010.1 68416.m06964 expressed protein
Length = 1254
Score = 31.1 bits (67), Expect = 0.34
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 298 QLEQLDAMLDKELALEGRAYGNDALVADE 384
++EQ++A L +++ +E YGN LV DE
Sbjct: 124 RVEQMEARLKEDILMEASRYGNKILVTDE 152
>At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1
like protein identical to SP|Q9S7R5 TWIN SISTER of FT
protein (TFL1 like protein) {Arabidopsis thaliana};
contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 30.7 bits (66), Expect = 0.45
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 250 TFILASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAHAL 414
T ++ V + S+ HQ E L ++ A G A+GN+ + + P P + H +
Sbjct: 66 TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRI 120
>At2g11620.1 68415.m01249 hypothetical protein
Length = 491
Score = 30.7 bits (66), Expect = 0.45
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 67 VMEKEHQPDSMATITMKPEYPPSEVYSTSEPPPAYRHRVS 186
V+ + + M + MKPE PP ++Y +P P + S
Sbjct: 253 VLRYDGNNNGMQGVLMKPEKPPQDLYGQCQPQPQIQRNFS 292
>At5g46870.1 68418.m05775 RNA recognition motif (RRM)-containing
protein similar to unknown protein (pir||C71447)
Length = 295
Score = 30.3 bits (65), Expect = 0.59
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +1
Query: 91 DSMATITMKPEY--PPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILA 264
DS T+TM P+Y PP + S + + T ++ V S I F+L
Sbjct: 68 DSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMISKGFVLG 127
Query: 265 SSWVAARSSCHQLEQL 312
+A S + QL
Sbjct: 128 KDAIAKAKSLDEKHQL 143
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 160 PPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 270
PP H +S S+ + KI+ V SSF+L T +ASS
Sbjct: 7 PPRQTHYLS-SISLLKISISKVFVSSFLLLTLSMASS 42
>At1g44820.1 68414.m05134 aminoacylase, putative /
N-acyl-L-amino-acid amidohydrolase, putative similar to
aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase
ACY-1)[Homo sapiens] SWISS-PROT:Q03154
Length = 438
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 142 YSTSEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASSWVAA 282
++T+ P P Y +S + A+ LT FI G IL +W+ +
Sbjct: 39 FNTAHPNPNYTAPISFLINQAQSIGLTTKTIEFISGKPILLITWLGS 85
>At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family
protein Common family members: At5g26070, At5g19800,
At1g72790 [Arabidopsis thaliana]
Length = 575
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 67 VMEKEHQPDSMA--TITMKPEYPPSEVYSTSEPPP 165
+ E+E +P + T +KP PP + +T PPP
Sbjct: 222 IEEEESEPKEIQIDTFVVKPSSPPQQPPATPPPPP 256
>At5g43420.1 68418.m05309 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 zinc finger
protein ATL4 [Arabidopsis thaliana] GI:4928399; contains
Pfam profile PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 375
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +1
Query: 157 PPPAYRHRVS---TSVQIAKIAALTVVASSFILGTF 255
PPP HR S TS I +A + ++A++F+L ++
Sbjct: 19 PPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSY 54
>At3g45800.1 68416.m04957 hypothetical protein
Length = 563
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 112 MKPEYPPSEVYSTSEPPP 165
MKPE PP ++Y +P P
Sbjct: 458 MKPEKPPQDLYGQCQPQP 475
>At3g45770.2 68416.m04947 oxidoreductase, zinc-binding dehydrogenase
family protein similar to nuclear receptor binding
factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724;
contains Pfam zinc-binding dehydrogenase domain PF00107
Length = 297
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 217 LTVVASSFILGTFILASSWVAARSSCHQLEQLDAMLDKELAL--EGRAYGNDALVADEPL 390
+TV +SFI L W+ + S ++++ M+D L L +G+ LV E
Sbjct: 217 ITVSTTSFIFKDLALRGFWLQSWLSMGKVKECREMIDYLLGLARDGKLKYETELVPFEEF 276
Query: 391 PLANAHAL 414
P+A AL
Sbjct: 277 PVALDKAL 284
>At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogenase
family protein similar to nuclear receptor binding
factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724;
contains Pfam zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 217 LTVVASSFILGTFILASSWVAARSSCHQLEQLDAMLDKELAL--EGRAYGNDALVADEPL 390
+TV +SFI L W+ + S ++++ M+D L L +G+ LV E
Sbjct: 295 ITVSTTSFIFKDLALRGFWLQSWLSMGKVKECREMIDYLLGLARDGKLKYETELVPFEEF 354
Query: 391 PLANAHAL 414
P+A AL
Sbjct: 355 PVALDKAL 362
>At3g19070.1 68416.m02422 cell wall protein-related similar to
vegetative cell wall protein gp1 [Chlamydomonas
reinhardtii] gi|12018147|gb|AAG45420;
Length = 346
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +1
Query: 82 HQPDSMATITMKPE---YPPSEVYSTSEPPPAYRHRVSTSVQIA--KIAALTVVASSF 240
HQP S +T+ PPS S+ +PP + R ++SV + ++ T+ SSF
Sbjct: 113 HQPPSSSTLATSSSPSLQPPSMSSSSLQPPASLREFFTSSVSYSHQPSSSSTLATSSF 170
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 236 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 391
P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1055 PMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLDRAMC 1109
>At2g14770.1 68415.m01668 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1139
Score = 27.1 bits (57), Expect = 5.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 236 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 391
P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1036 PMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLDRAMC 1090
>At1g65480.1 68414.m07429 flowering locus T protein (FT) identical
to SP|Q9SXZ2 FLOWERING LOCUS T protein {Arabidopsis
thaliana}; contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +1
Query: 250 TFILASSWVAARSSCHQLEQLDAMLDKELALEGRAYGNDALVADEPLPLANAH 408
T ++ V + S+ H E L ++ A G +GN+ + + P P A H
Sbjct: 66 TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIH 118
>At4g25320.1 68417.m03643 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 404
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 76 KEHQPDSMATITMKPEYPPSEVYSTSEPPPAYRHR 180
+++ PD +T+ P S V TSE PP R R
Sbjct: 93 RKYNPDGTLVVTLSPMPISSSVPLTSEFPPRKRGR 127
>At4g08880.1 68417.m01464 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At1g34730, At1g27790, At1g34740, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1463
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 236 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 391
P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 896 PMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLVRAMC 950
>At4g03300.1 68417.m00451 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790 , At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886
Length = 1285
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 236 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 391
P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1147 PMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLVRAMC 1201
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 236 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 391
P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1007 PMNWKSEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLVRAMC 1061
>At5g54700.1 68418.m06812 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 480
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 67 VMEKEHQPDSMATITMKPEYPPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASSFIL 246
VM E ++ TIT+ S ++ PP ++ STS + +AA TV F +
Sbjct: 204 VMHSEALQNARNTITVVAILIASVTFAVGMNPPGGIYQESTSSKGKSVAAKTVAFKIFYV 263
Query: 247 GTFI--LASSWV 276
I S W+
Sbjct: 264 SNSIALFTSLWI 275
>At3g42730.1 68416.m04462 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1314
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 236 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 391
P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1060 PMNWKGEHWVALGINLNERLITVYDALISHTRESAVKARMTPICEMMPYLVRAMC 1114
>At3g26020.1 68416.m03241 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit B', putative similar to
SWISS-PROT:Q28653 serine/threonine protein phosphatase
2A, 56 kDa regulatory subunit, delta isoform (PP2A, B
subunit, B' delta isoform, PP2A, B subunit, B56 delta
isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B
subunit, R5 delta isoform, PP2A, B subunit, B'-gamma)
[Oryctolagus cuniculus]; contains Pfam domain, PF01603:
Protein phosphatase 2A regulatory B subunit (B56 family)
Length = 510
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 76 FPSRPNTVYQNLFIARLWVTRTVSD 2
F PNT QNLFI +L + R V D
Sbjct: 97 FKDVPNTEKQNLFIKKLNLCRVVFD 121
>At1g26240.1 68414.m03201 proline-rich extensin-like family protein
similar to hydroxyproline-rich glycoprotein precursor
gi|727264|gb|AAA87902; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 478
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 115 KPEYPPSEVYSTSEPPPAYRHRVST 189
K PP VY + PPP+Y + S+
Sbjct: 448 KSPSPPPYVYKSPPPPPSYSYSYSS 472
>At1g25886.1 68414.m03180 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At4g03300
Length = 1201
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 236 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPT---EMMPW*RMSLC 391
P +W+ +W+ +G L I+ + T+ S KA T EMMP+ ++C
Sbjct: 1034 PMNWKSEHWVALGINLNERLITVYDALISYTRESAVKARMTPICEMMPYLVRAMC 1088
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,230,447
Number of Sequences: 28952
Number of extensions: 205247
Number of successful extensions: 1053
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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