Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0128
(393 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 33 0.11
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 31 0.33
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 31 0.44
11_06_0070 + 19802893-19803026,19803054-19803816 30 0.58
02_04_0084 - 19579104-19579230,19580323-19580417,19580578-195807... 29 1.0
01_05_0242 + 19828521-19829252 29 1.3
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 1.8
04_01_0208 + 2596110-2596928 28 2.3
03_05_0048 + 20258561-20259346 28 2.3
09_04_0505 + 18183203-18183294,18183388-18183436,18183719-181840... 28 3.1
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 3.1
03_04_0213 - 18679114-18679722 28 3.1
02_02_0357 + 9360108-9360754,9363732-9364137 28 3.1
02_02_0355 + 9312814-9313650 28 3.1
12_01_0694 - 5923836-5924450 27 5.4
09_04_0651 - 19224403-19225032 27 5.4
08_02_0229 - 14540302-14540736 27 5.4
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 27 5.4
01_06_1685 + 39170428-39171735 27 5.4
01_01_0743 - 5763654-5766902 27 5.4
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 27 7.1
08_02_0535 + 18298244-18298486,18299937-18300353,18300680-183007... 27 7.1
05_04_0433 - 21181713-21183998 27 7.1
01_01_1034 + 8181373-8181484,8182810-8183384,8185410-8185468,818... 27 7.1
04_04_0479 - 25524753-25525426,25525736-25525819,25526255-255264... 26 9.4
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 32.7 bits (71), Expect = 0.11
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -3
Query: 367 LVTVTGADGKATLAYRVVEAHVRSEDWSS 281
L V GADGK TL + VV+ VRSED S
Sbjct: 632 LADVKGADGKTTLLHFVVQEIVRSEDAKS 660
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 31.1 bits (67), Expect = 0.33
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = -3
Query: 367 LVTVTGADGKATLAYRVVEAHVRSE 293
LV V GADGK TL + V+E V+SE
Sbjct: 572 LVDVKGADGKTTLLHFVIEEIVKSE 596
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 30.7 bits (66), Expect = 0.44
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 367 LVTVTGADGKATLAYRVVEAHVRSEDWSS 281
L V G DGK TL + VV+ +RSED S
Sbjct: 673 LADVKGTDGKTTLLHFVVQEIIRSEDAKS 701
>11_06_0070 + 19802893-19803026,19803054-19803816
Length = 298
Score = 30.3 bits (65), Expect = 0.58
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3
Query: 199 RDAGSSPAHRPVHRVRGGGCCKCPVQGCAGRRTL 98
R +G A R R RGGGC G AGRRT+
Sbjct: 174 RASGGHRAKRRAGRGRGGGCDAGEGDGTAGRRTV 207
>02_04_0084 -
19579104-19579230,19580323-19580417,19580578-19580719,
19581155-19581189,19581493-19581632,19581678-19581770,
19584007-19584244
Length = 289
Score = 29.5 bits (63), Expect = 1.0
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 154 GHDGPDDGRGYFLHHVLPV*VHKFFDGSCQHLVSIKQILKLEMSSSLH--FVRVLP 315
GH GP+D + Y LH +PV F S + ++ I+ L SS +H FV + P
Sbjct: 154 GH-GPEDDKYYLLHFTIPVLAANAFHHSWT-VKAMLHIISLICSSEIHVLFVYLCP 207
>01_05_0242 + 19828521-19829252
Length = 243
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -3
Query: 202 GRDAGSSPAHRPVHRVRGGGCCKCPVQGCAGRRT 101
GR +G P R R RGG C G AGR T
Sbjct: 134 GRVSGDFPVKRRRSRGRGGSCDVADGDGTAGRHT 167
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 367 LVTVTGADGKATLAYRVVEAHVRSE 293
L V GADGK TL + VV+ +RSE
Sbjct: 649 LSDVKGADGKTTLLHFVVQEIIRSE 673
>04_01_0208 + 2596110-2596928
Length = 272
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -3
Query: 181 PAHRPVHRVRGGGCCKCPVQGCAGRRT 101
PA R R RGGGC G AGRR+
Sbjct: 111 PAKRRADRGRGGGCEAEGEDGAAGRRS 137
>03_05_0048 + 20258561-20259346
Length = 261
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3
Query: 202 GRDAGSSPAHRPVHRVRGGGCCKCPVQGCAGRRT 101
GR +G PA R R RGG C G GRR+
Sbjct: 124 GRVSGDFPAKRRSDRGRGGSCEAEGGDGATGRRS 157
>09_04_0505 +
18183203-18183294,18183388-18183436,18183719-18184003,
18184914-18185135,18185272-18185421
Length = 265
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 193 AGSSPAHRPVHRVRGGGCCKCPVQGCAGRRTLLAVN 86
A + H P R+RGGG P A R L AV+
Sbjct: 2 AEKAVGHGPRTRIRGGGLAAAPTAPSAAARRLSAVS 37
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 367 LVTVTGADGKATLAYRVVEAHVRSE 293
L V G DGK TL + VV+ +RSE
Sbjct: 638 LADVKGVDGKTTLLHFVVQEIIRSE 662
>03_04_0213 - 18679114-18679722
Length = 202
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 202 GRDAGSSPAHRPVHRVRGGGCCKCPVQGCAGR 107
GR +G PA R R RG GC G AGR
Sbjct: 80 GRVSGGFPAKRRRRRGRGSGCDAGGDDGTAGR 111
>02_02_0357 + 9360108-9360754,9363732-9364137
Length = 350
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 202 GRDAGSSPAHRPVHRVRGGGCCKCPVQGCAGR 107
G +G P +R R RGGGC G AGR
Sbjct: 185 GHRSGDFPTNRRWRRGRGGGCDAGGGDGTAGR 216
>02_02_0355 + 9312814-9313650
Length = 278
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 202 GRDAGSSPAHRPVHRVRGGGCCKCPVQGCAGR 107
G +G P +R R RGGGC G AGR
Sbjct: 205 GHRSGDFPTNRRWRRGRGGGCDAGGGDGTAGR 236
>12_01_0694 - 5923836-5924450
Length = 204
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -3
Query: 196 DAGSSP----AHRPVHRVRGGGCCKCPVQGCAGRRT 101
D+G++P A R R RGGGC G AGRR+
Sbjct: 133 DSGNAPPEHRAKRRAGRWRGGGCDAGGGDGTAGRRS 168
>09_04_0651 - 19224403-19225032
Length = 209
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 235 SRRRICELKLEGRDAGSSPAHRPVHRVRGGGCCKCPVQGCA 113
SRRR+ + +AG++ GG CC C +G A
Sbjct: 130 SRRRVADDHAAAAEAGTNKGFAGAAAGVGGRCCVCMARGKA 170
>08_02_0229 - 14540302-14540736
Length = 144
Score = 27.1 bits (57), Expect = 5.4
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -3
Query: 232 RRRICELKLEGRDAGSSPAHRPVHRVRGGGCCKCPVQGCAGRRTLLAV 89
R+R C + G +G + R RGGGC G AGRR AV
Sbjct: 67 RQRHCRRR--GGTSGGLRGKQRAGRRRGGGCDAGGGDGTAGRRANAAV 112
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 367 LVTVTGADGKATLAYRVVEAHVRSE 293
L V G DGK TL + VV+ +RSE
Sbjct: 867 LSDVKGTDGKTTLLHFVVQEIIRSE 891
>01_06_1685 + 39170428-39171735
Length = 435
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -1
Query: 210 NWKDVMQEVAPPIVRSIVSEVVAAVNALYKAV---PAEELYLQ*TYCNFKRE 64
+W+ +++ P++R V+ V A YKA PA YL C + RE
Sbjct: 68 DWEGMLEPAPHPVLRGEVARYGELVGACYKAFDLDPASRRYLN---CKYGRE 116
>01_01_0743 - 5763654-5766902
Length = 1082
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 309 HTYEVKTGAHFQFENLFNG 253
H Y VKTG ++FE+L NG
Sbjct: 320 HGYSVKTGLLWEFESLENG 338
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 184 SPAHRPVHRVRGGGCCKCP 128
+PA PVH+V+ GG K P
Sbjct: 116 APARSPVHKVKDGGHTKIP 134
>08_02_0535 +
18298244-18298486,18299937-18300353,18300680-18300757,
18300893-18301045,18301131-18301239,18301321-18301487,
18301571-18301954
Length = 516
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 154 GHDGPDDGRGYFLHHVLPV*VHKFFDGSCQHLVSIKQILKLE 279
G+D D RG H ++ F G+C + KQ++KLE
Sbjct: 462 GNDQFSDNRGDSSHSEPATYINAAFVGACAAAMGQKQVVKLE 503
>05_04_0433 - 21181713-21183998
Length = 761
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 118 SLVQGIYSSHHLGHDGPDDGRGYFLHHVLP 207
++ +G++ S G+DGPD G FLH+ P
Sbjct: 307 AMQRGVFVSTSAGNDGPDPG---FLHNGTP 333
>01_01_1034 +
8181373-8181484,8182810-8183384,8185410-8185468,
8185785-8185878
Length = 279
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -3
Query: 232 RRRICELKLEGRDAGSSPA-HRPVH 161
RRR C+ + R G SP+ HR VH
Sbjct: 142 RRRRCDASRQARGCGGSPSNHRGVH 166
>04_04_0479 -
25524753-25525426,25525736-25525819,25526255-25526483,
25526910-25527357,25528462-25528569,25528681-25528806,
25528887-25528981,25529062-25529147,25529253-25529408,
25529523-25529766
Length = 749
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 114 AQPCTGHLQQPPPRT 158
A PC GH PPP T
Sbjct: 311 ASPCAGHRLSPPPST 325
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,049,328
Number of Sequences: 37544
Number of extensions: 236534
Number of successful extensions: 908
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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