Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0128
         (393 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050397-1|AAH50397.1|  489|Homo sapiens MARCH9 protein protein.       29   5.5  
BC036455-1|AAH36455.2|  346|Homo sapiens membrane-associated rin...    29   5.5  
AK095107-1|BAC04487.1|  224|Homo sapiens protein ( Homo sapiens ...    28   9.5  

>BC050397-1|AAH50397.1|  489|Homo sapiens MARCH9 protein protein.
          Length = 489

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 217 ELKLEGRDAGSSPAHRPVHRV-RGGGCCKCPVQGCAGR 107
           ELKL     G  P   P  R  RGGGC   P  GC+ R
Sbjct: 155 ELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTR 192


>BC036455-1|AAH36455.2|  346|Homo sapiens membrane-associated ring
           finger (C3HC4) 9 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -3

Query: 217 ELKLEGRDAGSSPAHRPVHRV-RGGGCCKCPVQGCAGR 107
           ELKL     G  P   P  R  RGGGC   P  GC+ R
Sbjct: 12  ELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTR 49


>AK095107-1|BAC04487.1|  224|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37788 fis, clone BRHIP2028593, weakly similar to
           Homo sapiens IL-1 receptor accessory protein mRNA. ).
          Length = 224

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -3

Query: 217 ELKLEGRDAGSSPAHRPV--HRVRGGGCCKCPVQGCAGRRTL 98
           EL+   R AGS PA   +  HR +    C+C V  C G   L
Sbjct: 119 ELQSSERAAGSPPAPGTMSKHRGKSSATCRCCVTYCEGENHL 160


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,409,950
Number of Sequences: 237096
Number of extensions: 1174237
Number of successful extensions: 3246
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3246
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)