Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0128
(393 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g23730.1 68416.m02984 xyloglucan:xyloglucosyl transferase, pu... 30 0.64
At5g47690.1 68418.m05887 expressed protein 28 2.0
At3g62850.1 68416.m07061 zinc finger protein-related contains Pf... 28 2.0
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 28 2.6
At1g69550.1 68414.m07998 disease resistance protein (TIR-NBS cla... 28 2.6
At5g01190.1 68418.m00024 laccase, putative / diphenol oxidase, p... 27 3.4
At5g55370.1 68418.m06899 long-chain-alcohol O-fatty-acyltransfer... 27 4.5
At4g25070.1 68417.m03596 expressed protein ; expression supporte... 27 4.5
At1g11700.1 68414.m01343 expressed protein contains Pfam profile... 27 4.5
At2g06850.1 68415.m00767 xyloglucan:xyloglucosyl transferase / x... 27 6.0
At3g06490.1 68416.m00753 myb family transcription factor (MYB108... 26 7.9
At1g61300.1 68414.m06909 disease resistance protein (NBS-LRR cla... 26 7.9
At1g23000.1 68414.m02874 heavy-metal-associated domain-containin... 26 7.9
>At3g23730.1 68416.m02984 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase-related protein
GI:1244760 from [Arabidopsis thaliana]
Length = 291
Score = 29.9 bits (64), Expect = 0.64
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 101 SSSAGTALYRAFTAATTSDTMDRTMGGATSCITSFQFEFTNSSTGVANTL 250
S + TA YR F AA + G++ C F+ FTN + VAN L
Sbjct: 207 SKAPFTAYYRGFNAAACT-----VSSGSSFCDPKFKSSFTNGESQVANEL 251
>At5g47690.1 68418.m05887 expressed protein
Length = 1638
Score = 28.3 bits (60), Expect = 2.0
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Frame = +1
Query: 25 YQKKVILFITYT-AFPFKITISLLQVKFFGRHSL---VQGIYSSHHLGHDGPDDGRGYFL 192
Y K +L + Y +F F IT S + +H+L +Q Y + D L
Sbjct: 902 YVKDRVLEMKYACSFLFDITGSNVLESEEDKHNLADIIQHSYQTKVRKISAQTDANSVTL 961
Query: 193 --HHVLPV*VHKFFDGSCQHLVSIKQILKLEM 282
HH+LP VH SC + K + + EM
Sbjct: 962 YPHHILPYLVHALAHHSCPDVEKCKDVKEYEM 993
>At3g62850.1 68416.m07061 zinc finger protein-related contains Pfam
profiles PF04396: Protein of unknown function DUF537,
weak hit to PF00096: Zinc finger, C2H2 type
Length = 472
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 28 QKKVILFITYTAFPFKITISLLQVKFFGRHSLVQGIYSSHHLGH 159
+ K LF+ Y+ P+K+++ L ++ + LV G++ S H
Sbjct: 353 ETKYNLFLAYSYRPYKMSVLLTSAEWLWKSLLVAGVFFSSPYHH 396
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 367 LVTVTGADGKATLAYRVVEAHVRSE 293
LV + G DGK TL + VV+ RSE
Sbjct: 682 LVDIKGVDGKTTLLHFVVQEITRSE 706
>At1g69550.1 68414.m07998 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 703
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 88 LLQVKFFGRHSLVQGIYSSHHLGHDGPDDG 177
+ V F H +Q I+ H GHD PDDG
Sbjct: 408 IYNVDFPPDHEALQ-IFCIHAFGHDSPDDG 436
>At5g01190.1 68418.m00024 laccase, putative / diphenol oxidase,
putative similar to diphenol oxidase [Nicotiana
tabacum][GI:1685087]
Length = 553
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 224 SSTGVANTLFPLNKFSNWK*APVFTSYVCFHDSICQCGLAVSSCHCHQIG 373
++T VANT + N K P HD + GL ++ CH + G
Sbjct: 318 NATSVANTFVNSLRSLNSKTYPANVPITVDHDLLFTVGLGINRCHSCKAG 367
>At5g55370.1 68418.m06899 long-chain-alcohol O-fatty-acyltransferase
family protein / wax synthase family protein contains
similarity to wax synthase similarity to wax synthase
wax synthase - Simmondsia chinensis, PID:g5020219
similar to wax synthase [gi:5020219] from Simmondsia
chinensis
Length = 343
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -1
Query: 276 QFENLFNGNKVLATPVEEFVNSNWKDVMQEVAPPIVRSIVSEVVAAVNALYKA 118
+ E +FN + LAT ++EF + W ++ V P V V A + L++A
Sbjct: 180 EMEPVFN-DPYLATSLQEFWSRRWNLMVPAVLRPAVHIPVQRFCAPLLGLHRA 231
>At4g25070.1 68417.m03596 expressed protein ; expression supported
by MPSS
Length = 765
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 202 GRDAGSSPAHRPVHRVRGGG 143
G A SSP P HR+ GGG
Sbjct: 6 GTSASSSPTMSPSHRMSGGG 25
>At1g11700.1 68414.m01343 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 201
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 214 LKLEGRDAGSSPAHRPVHRVRGGG 143
L L DA SSP R VH++RGGG
Sbjct: 75 LSLAFEDASSSP--RIVHQIRGGG 96
>At2g06850.1 68415.m00767 xyloglucan:xyloglucosyl transferase /
xyloglucan endotransglycosylase / endo-xyloglucan
transferase (EXT) (EXGT-A1) identical to endo-xyloglucan
transferase (ext) GI:469484 and endoxyloglucan
transferase (EXGT-A1) GI:5533309 from [Arabidopsis
thaliana]
Length = 296
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 269 SNWK*APVFTSYVCFHDSICQCGLAVSSC 355
+NW AP SY FH CQ + C
Sbjct: 212 TNWANAPFVASYKGFHIDGCQASVEAKYC 240
>At3g06490.1 68416.m00753 myb family transcription factor (MYB108)
identical to transcription factor MYB108 GI:15375290
from [Arabidopsis thaliana]
Length = 323
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 140 AATTSDTMDRTMGGATSCITSFQFEFTN 223
AATT+ T G +SCIT+ +F N
Sbjct: 161 AATTTTTTTTGSAGTSSCITTSNNQFMN 188
>At1g61300.1 68414.m06909 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 762
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 324 IESWKHTYEVKTGAHFQFENLFNGNKVL 241
++ W+H +V T + +F N+ GNK+L
Sbjct: 253 VQEWEHAIDVLTRSAAEFSNM--GNKIL 278
>At1g23000.1 68414.m02874 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains PF00403 Heavy-metal-associated
domain
Length = 358
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 364 VTVTGADGKATLAYRVVEAHVRSEDWSSFP 275
VTV+G+ ATL ++V+A +E WS P
Sbjct: 52 VTVSGSVDSATLINKLVKAGKHAELWSPNP 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,632,836
Number of Sequences: 28952
Number of extensions: 180889
Number of successful extensions: 547
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 567552648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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