Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0123
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82276-4|CAB05241.3|  327|Caenorhabditis elegans Hypothetical pr...    33   0.17 
U88177-4|AAB42289.2|   80|Caenorhabditis elegans Hypothetical pr...    31   0.88 
AF022982-5|AAB69936.2|  799|Caenorhabditis elegans Hypothetical ...    31   0.88 
AF043699-4|AAB97568.1|  610|Caenorhabditis elegans Serotonin/oct...    29   2.7  
U28737-6|AAL02486.1|  566|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U39678-6|AAK39206.1|  208|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF016447-5|AAX22290.1|  397|Caenorhabditis elegans Serpentine re...    28   6.2  
Z92829-14|CAB07342.2|  337|Caenorhabditis elegans Hypothetical p...    28   8.2  
U55366-7|AAA97985.2|  323|Caenorhabditis elegans Serpentine rece...    28   8.2  

>Z82276-4|CAB05241.3|  327|Caenorhabditis elegans Hypothetical
           protein K03D3.4 protein.
          Length = 327

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
 Frame = +1

Query: 136 IVYPMYGFILFYRSIRKKPCKMLS*TNYEVHFFYTYIFSTN--YLLYYYFIVCT---G-- 294
           IV+P Y ++    +IR +   +   TN+    FY  + + N  Y+L+  F++CT   G  
Sbjct: 38  IVFPFYVYVHKANNIRDREVVVFQITNH----FYKCVVAMNIGYVLFGIFVLCTLAEGLL 93

Query: 295 -YIKINIFH*----VFNTNCLYELFKYLPRKKI*ELFAEYF-PVLD---ISLHKYLSIYF 447
            YI + IF      VF    + ++F  L      E F  YF P  +   IS+ KY+  Y 
Sbjct: 94  IYISLIIFPIGIVYVFIEMIIADVFHLLISLLAMEKFFIYFFPRWEKTVISIQKYIHKYI 153

Query: 448 YYLAFNLCSYYV 483
            ++    CS Y+
Sbjct: 154 VFVYLACCSRYM 165


>U88177-4|AAB42289.2|   80|Caenorhabditis elegans Hypothetical
           protein F53E10.3 protein.
          Length = 80

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = +1

Query: 229 FFYTYIFSTNYLLYYYFIVCTGYIKINIFH*VFNTNCLYELFKYLPRKKI*ELFAEYFPV 408
           FF+ ++F   Y L+++F         + FH +F       +FK L RK++ E     FP 
Sbjct: 10  FFFKFVFDAPYELFWHF--------PHQFH-LFRNFQKIPIFKNLFRKRLSEALNFNFPT 60

Query: 409 LDISLHKYLSIYFYY 453
             + L   LSI+FY+
Sbjct: 61  -PVKLFLKLSIFFYF 74


>AF022982-5|AAB69936.2|  799|Caenorhabditis elegans Hypothetical
           protein T23B12.4 protein.
          Length = 799

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 14/62 (22%), Positives = 32/62 (51%)
 Frame = +1

Query: 325 FNTNCLYELFKYLPRKKI*ELFAEYFPVLDISLHKYLSIYFYYLAFNLCSYYVNIVDLFV 504
           FN   L+   ++ PR+ + +L  E   +L  +  K+    F   A+++C    + +++F+
Sbjct: 152 FNPQMLFSHQRWAPRRVVVQLMREQVTLLGTTGRKWRESAFSKQAYDICCAVASRLEMFI 211

Query: 505 MI 510
           M+
Sbjct: 212 ML 213


>AF043699-4|AAB97568.1|  610|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 3 protein.
          Length = 610

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
 Frame = -1

Query: 336 IRIENLMKNINF---YITSTHNEIIIQ*IIRRKYVCVKKMHFIICLAQHFARLFAYGPVK 166
           I++ +++ +I F   Y+ S  N +I     R   +C K++  + C   H        P +
Sbjct: 510 IKLNDVVWSIVFWLGYLNSALNPVIYTVFNREFRICFKRL--LTC--HHLNH-----PTQ 560

Query: 165 KYKTVHRVNNTIIGTLPAINNVFKTSV*NCDQFSN 61
           KY   +  N+T I +  A+N V +TS+ N  Q  N
Sbjct: 561 KYTNNNSYNSTAIRSTNAVNRVPQTSLGNYTQTQN 595


>U28737-6|AAL02486.1|  566|Caenorhabditis elegans Hypothetical
           protein F14B8.7 protein.
          Length = 566

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 259 YLLYYYFIVCTGYIKINIFH*VFNTNCLYELFK--YLPRKKI*ELFAEYFPV 408
           Y  YY+ IV  G   + IF+   ++ C  E++K  + P KK  E+  E+ P+
Sbjct: 515 YGSYYWAIVVRGCSPLTIFYRFHSSACFAEIWKKTFRPPKKPKEIENEHTPL 566


>U39678-6|AAK39206.1|  208|Caenorhabditis elegans Hypothetical
           protein C39D10.2 protein.
          Length = 208

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 193 CKMLS*TNYEVHFFYTYIFSTNYLLYYYFIVCTGYIKINIFH*VFNTNC 339
           C++L     ++H  YT +  T + ++ YF V    I  N+FH   N NC
Sbjct: 50  CQILD-KGSQIHS-YTILSLTFFRIFKYFFVSYFSIFFNVFHGWSNKNC 96


>AF016447-5|AAX22290.1|  397|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 19 protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 20/83 (24%), Positives = 37/83 (44%)
 Frame = +1

Query: 37  LKYFAKIFITKLVAVLH*SFKYIINRWKSAYNSIVYPMYGFILFYRSIRKKPCKMLS*TN 216
           LKY +K  +   V VL      +I  +  + + I++ +Y     Y+++   PC +    +
Sbjct: 107 LKYSSKHMLPSNVRVLVNII--LILMFTHSIDMIIFHVYHIFRSYKAVESDPCSVRVKIS 164

Query: 217 YEVHFFYTYIFSTNYLLYYYFIV 285
           +   F Y Y F T  L +  + V
Sbjct: 165 FCAPFRYIYSFCTLGLAFCQYCV 187


>Z92829-14|CAB07342.2|  337|Caenorhabditis elegans Hypothetical
           protein F10A3.8 protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +2

Query: 59  LLLNWSQFYTEVLNTLLIAGRVPIIVLFTLCTVLYFF 169
           L +++ +   ++  TL+I   +PI  L+T  T++Y F
Sbjct: 239 LAVSYQEIQRQLFQTLVIQTIIPITFLYTPVTLMYLF 275


>U55366-7|AAA97985.2|  323|Caenorhabditis elegans Serpentine
           receptor, class x protein74 protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 166 FYRSIRKKPCKMLS*TNYEVHFFYTYIFSTNYLLYYYFIVCTGYIKINIFH 318
           F R      C+  S  N +   F+ ++FS  YL+  Y I    + +I  F+
Sbjct: 159 FKRQYENASCESTSTNNVDDFGFFIFLFSVGYLVLLYVINLLTFYQILKFY 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,288,480
Number of Sequences: 27780
Number of extensions: 338455
Number of successful extensions: 906
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)