Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0122
(370 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 101 2e-22
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 52 1e-07
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 51 2e-07
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 49 9e-07
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 49 9e-07
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 49 1e-06
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 48 2e-06
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 48 2e-06
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 47 4e-06
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 46 1e-05
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 46 1e-05
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 44 3e-05
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 43 6e-05
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 43 6e-05
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 43 8e-05
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 43 8e-05
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 42 1e-04
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 42 1e-04
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 40 4e-04
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 40 4e-04
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 40 6e-04
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 40 6e-04
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 40 7e-04
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 40 7e-04
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 40 7e-04
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 39 0.001
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 39 0.001
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 39 0.001
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 39 0.001
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 38 0.002
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 38 0.002
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 38 0.002
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 38 0.002
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 38 0.003
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 36 0.007
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 36 0.007
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 36 0.009
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 36 0.009
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 36 0.009
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 36 0.009
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 36 0.009
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 36 0.009
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 36 0.009
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 36 0.012
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 36 0.012
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 36 0.012
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 36 0.012
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 36 0.012
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 34 0.028
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 34 0.028
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 33 0.064
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 33 0.064
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 33 0.064
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 32 0.11
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 31 0.26
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 31 0.26
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 30 0.45
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 30 0.59
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 30 0.59
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 29 1.4
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 29 1.4
U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical pr... 27 3.2
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 27 3.2
AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protei... 27 3.2
AC024812-8|AAF59557.4| 912|Caenorhabditis elegans Hypothetical ... 27 3.2
AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A prot... 27 3.2
U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 26 7.3
U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin iso... 26 7.3
AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L prot... 26 7.3
AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical ... 26 7.3
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 26 9.7
Z46787-4|CAA86742.1| 166|Caenorhabditis elegans Hypothetical pr... 26 9.7
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 26 9.7
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 26 9.7
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 26 9.7
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 101 bits (242), Expect = 2e-22
Identities = 53/70 (75%), Positives = 55/70 (78%)
Frame = +3
Query: 159 MATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL 338
MA G A RP G +T CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL
Sbjct: 1 MAARNAGTA-RPGGPNRT--CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL 57
Query: 339 TQAIRFDDTT 368
TQ + DD T
Sbjct: 58 TQTVCLDDAT 67
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 52.0 bits (119), Expect = 1e-07
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT 368
FK+VL+G+S VGKS+L+ RF + +FH +STIG F T++I + T
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKT 59
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 51.2 bits (117), Expect = 2e-07
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +3
Query: 213 KVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDD 362
K +FK+VLLGE VGKSSLVLRFV+ +F STI A+F + + +D
Sbjct: 9 KSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVED 58
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 49.2 bits (112), Expect = 9e-07
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +3
Query: 213 KVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT 368
K K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ + DD T
Sbjct: 6 KKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRT 57
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 49.2 bits (112), Expect = 9e-07
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT 368
FK+VL+G+S VGKS+L+ RF + +F+ +STIG F T++I + T
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKT 59
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +3
Query: 222 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT 368
+FKLV LGE +VGK+SL+ RF+ F ++TIG FL++ + +D T
Sbjct: 10 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 58
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +3
Query: 222 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT 368
+FKLV LGE +VGK+S++ RF+ F ++TIG FL++ + +D T
Sbjct: 11 KFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 59
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +3
Query: 222 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT 368
+FKLV LGE +VGK+S++ RF+ F ++TIG FL++ + +D T
Sbjct: 11 KFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 59
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 47.2 bits (107), Expect = 4e-06
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +3
Query: 222 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT 368
+F+LV LGE +VGK+SL+ RF+ F ++TIG FL++ + +D T
Sbjct: 10 KFELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 58
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 45.6 bits (103), Expect = 1e-05
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT 368
FKL+L+G+S VGKS L+LRF + E STIG F + I D T
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 59
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 45.6 bits (103), Expect = 1e-05
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT 368
FKL+L+G+S VGKS L+LRF + E STIG F + I D T
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 59
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 44.4 bits (100), Expect = 3e-05
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD 359
K++++GES VGKSSL+LRFV F Q +TIG F ++ D
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAID 56
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 43.2 bits (97), Expect = 6e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF 335
FKL+++G+S VGKSSL+LRF F E +TIG F
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDF 47
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 43.2 bits (97), Expect = 6e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF 335
FKL+++G+S VGKSSL+LRF F E +TIG F
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDF 47
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 42.7 bits (96), Expect = 8e-05
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAI 350
FK+VL+G VGKS+L+ RF + +F+ + TIG F T+ I
Sbjct: 9 FKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKII 50
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 42.7 bits (96), Expect = 8e-05
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD 359
F++V+ G++AVGKSS V+R ++ QF ST+G F + + D
Sbjct: 462 FRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVD 506
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 42.3 bits (95), Expect = 1e-04
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF 335
FK++++G +AVGK+ L RF G+F E+ E+TIG F
Sbjct: 101 FKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDF 137
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +3
Query: 222 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAI 350
Q++L+++G+S VGKSSL+ F +G+ E + T+G F + I
Sbjct: 17 QYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMI 59
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIR 353
FK+VL+G + VGK+ LV +F +G F Q +TIG F+ + ++
Sbjct: 8 FKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVK 50
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 40.3 bits (90), Expect = 4e-04
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +3
Query: 210 TKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 323
+K+ +KLV++G+ VGKSSL ++F + QF +Y + TI
Sbjct: 13 SKLPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTI 50
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 40.3 bits (90), Expect = 4e-04
Identities = 17/38 (44%), Positives = 28/38 (73%)
Frame = +3
Query: 210 TKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 323
+K+ +KLV++G+ VGKSSL ++F + QF +Y + TI
Sbjct: 13 SKLPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTI 50
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 39.9 bits (89), Expect = 6e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD 359
FK+VL+G+ VGK+ +V RF G F + Q +TIG F + + D
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVD 55
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 39.9 bits (89), Expect = 6e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD 359
FK+VL+G+ VGK+ +V RF G F + Q +TIG F + + D
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVD 55
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 39.5 bits (88), Expect = 7e-04
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD 359
FK V++G+ VGKS+L+LRF+ F ST+G F + + D
Sbjct: 7 FKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEID 51
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 39.5 bits (88), Expect = 7e-04
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT 368
+K++++G+ VGK+S++ RFV F ++TIG F + + D+ T
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENT 59
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 39.5 bits (88), Expect = 7e-04
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDDTT 368
+K++++G+ VGK+S++ RFV F ++TIG F + + D+ T
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENT 59
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD 359
FKL+L+G+S VGK+ ++ RF F+ STIG F + I D
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELD 53
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD 359
FKL+L+G+S VGK+ ++ RF F+ STIG F + I D
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELD 53
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD 359
FKL+L+G+S VGK+ ++ RF F+ STIG F + I D
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELD 53
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD 359
FK +++G++ VGKS L+L+F +F + TIG F + + D
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID 51
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIR 353
FK+VL+ + VGK+ LV +F +G F Q +TIG F+ + ++
Sbjct: 8 FKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVK 50
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD 359
FK V++G+ VGKS+L+LRF F +T+G F + ++ D
Sbjct: 7 FKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQID 51
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 37.9 bits (84), Expect = 0.002
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Frame = +3
Query: 213 KVCQFKLVLLGESAVGKSSLVLRF---------VKGQFHEYQESTIGAAFLTQAIRFDDT 365
K K+++LG+S VGK+SL+ ++ V +F ++TIGA FLT+ + DD
Sbjct: 6 KKALLKVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNIDDR 65
Query: 366 T 368
T
Sbjct: 66 T 66
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFD 359
FK +++G++ VGKS L+L+F +F + TIG F + + D
Sbjct: 7 FKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID 51
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +3
Query: 162 ATNRTGAAQRPNGAPQTKVCQ-----FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 326
A +R A +P GA + Q FKL+++G S+VGK+S + R+ F ST+G
Sbjct: 11 ARSRMAAGGQPQGATPGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVG 70
Query: 327 AAFLTQAI 350
F + +
Sbjct: 71 IDFKVKTV 78
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 36.3 bits (80), Expect = 0.007
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT 341
K+V+LG+S VGK+S++ R G + +TIGA+F++
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVS 91
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 36.3 bits (80), Expect = 0.007
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT 341
K+V+LG+S VGK+S++ R G + +TIGA+F++
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVS 91
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 35.9 bits (79), Expect = 0.009
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 222 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 323
+FK+V+LG VGKS+L ++FV F E + TI
Sbjct: 3 EFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTI 36
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 35.9 bits (79), Expect = 0.009
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +3
Query: 222 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAI 350
++KLV++G+ VGKS+L ++ ++ F E + TI ++ Q +
Sbjct: 3 EYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVV 45
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 35.9 bits (79), Expect = 0.009
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAI 350
FKL+L+G+S VGK+ ++ RF F+ STIG F + I
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTI 51
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 35.9 bits (79), Expect = 0.009
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAI 350
FKL+L+G+S VGK+ ++ RF F+ STIG F + I
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTI 51
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 35.9 bits (79), Expect = 0.009
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIR 353
FK+V++G+ GKS ++LRF + F ST+G F + I+
Sbjct: 7 FKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIK 49
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 35.9 bits (79), Expect = 0.009
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +3
Query: 222 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAI 350
++KLV++G+ VGKS+L ++ ++ F E + TI ++ Q +
Sbjct: 6 EYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVV 48
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 35.9 bits (79), Expect = 0.009
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIR 353
FK+V +G+SAVGK+ + RF +F +TIG F + ++
Sbjct: 203 FKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMK 245
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 35.5 bits (78), Expect = 0.012
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 159 MATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL 338
MA P Q FKL+++G S+VGK+S + R+ F ST+G F
Sbjct: 1 MAAGGQPQGATPGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFK 60
Query: 339 TQAI 350
+ +
Sbjct: 61 VKTV 64
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 35.5 bits (78), Expect = 0.012
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 159 MATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL 338
MA P Q FKL+++G S+VGK+S + R+ F ST+G F
Sbjct: 1 MAAGGQPQGATPGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFK 60
Query: 339 TQAI 350
+ +
Sbjct: 61 VKTV 64
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 35.5 bits (78), Expect = 0.012
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 159 MATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL 338
MA P Q FKL+++G S+VGK+S + R+ F ST+G F
Sbjct: 1 MAAGGQPQGATPGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFK 60
Query: 339 TQAI 350
+ +
Sbjct: 61 VKTV 64
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 35.5 bits (78), Expect = 0.012
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +3
Query: 204 PQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAI 350
P KV K+V++G+ A GK+S+ RF K F + T+G F ++ I
Sbjct: 31 PDDKV--IKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRI 77
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 35.5 bits (78), Expect = 0.012
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 159 MATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL 338
MA P Q FKL+++G S+VGK+S + R+ F ST+G F
Sbjct: 1 MAAGGQPQGATPGQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFK 60
Query: 339 TQAI 350
+ +
Sbjct: 61 VKTV 64
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 34.3 bits (75), Expect = 0.028
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 225 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 326
FKLVL+G+ GK++ V R + G+F + +T+G
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 43
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 34.3 bits (75), Expect = 0.028
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 323
K+ ++G VGKS+LVLRF + F E ESTI
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTI 46
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 33.1 bits (72), Expect = 0.064
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 201 APQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAI 350
AP FK +++G+ VGKS L+ +F + +F TIG F T+ I
Sbjct: 4 APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRII 53
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 33.1 bits (72), Expect = 0.064
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 201 APQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAI 350
AP FK +++G+ VGKS L+ +F + +F TIG F T+ I
Sbjct: 4 APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRII 53
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 33.1 bits (72), Expect = 0.064
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 234 VLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF 335
+++GES VGKSSL+LRFV + +IG F
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDPERAVSIGVPF 34
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 32.3 bits (70), Expect = 0.11
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRFDD 362
K+V++GES GK++L+ F+ F +TIG F + ++ +D
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLND 52
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 31.1 bits (67), Expect = 0.26
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQF-HEYQESTIGAAFLTQAIRFDD 362
K++LLG+S GK+ L++R+ G F + ST+G + + I D
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGD 49
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 31.1 bits (67), Expect = 0.26
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQF-HEYQESTIGAAFLTQAIRFDD 362
K++LLG+S GK+ L++R+ G F + ST+G + + I D
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGD 49
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 30.3 bits (65), Expect = 0.45
Identities = 12/34 (35%), Positives = 24/34 (70%)
Frame = +3
Query: 222 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 323
+ KLV++G++ GK+SL++ + K QF + +T+
Sbjct: 4 KLKLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTV 37
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 29.9 bits (64), Expect = 0.59
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 323
KLV++G+ A GK+ L++ F K QF + T+
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTV 38
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 29.9 bits (64), Expect = 0.59
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTI 323
KLV++G+ A GK+ L++ F K QF + T+
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTV 38
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF 335
K + LG+S VGK+S + R+ F ST+G F
Sbjct: 9 KFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDF 44
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF 335
K + LG+S VGK+S + R+ F ST+G F
Sbjct: 9 KFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDF 44
>U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical
protein C52B11.5 protein.
Length = 238
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 228 KLVLLGESAVGKSSLVLRFVKGQFHEYQES 317
K++++G GKS+ + R G+FHE +++
Sbjct: 26 KIIVVGAKNAGKSTFIERVEFGKFHEEKQT 55
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +2
Query: 161 GDKQDRSRTEAQWRSTDKSLPVQAGVVGRVCGRQVLAGAPIRQGTVPRVPGEHHRGCVPH 340
G K +S D + Q G +GR GR + GAP +G + VPG P
Sbjct: 204 GPKGSPGEPPQDGKSGDDGMAGQPGPIGRP-GRDGMKGAPGARGRLIPVPGPQGAPGKPG 262
Query: 341 P 343
P
Sbjct: 263 P 263
>AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protein 1
protein.
Length = 1908
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -1
Query: 307 YSWNCPLTN-RSTSEDLPTADSP---NNTSLNWQTFVCGAPLGLCAAPVLFVAISL 152
Y C L N + SE + A P N+TS + FV P L + PVL+V ++
Sbjct: 127 YQGRCRLRNLHNISEVISEAIEPRVSNDTSSSVVIFVGSGPANLSSEPVLYVGATI 182
>AC024812-8|AAF59557.4| 912|Caenorhabditis elegans Hypothetical
protein Y54E10BR.1 protein.
Length = 912
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 212 CLWSAIGPLCGSGPVCRHIPPCYCSSVLNFFLGDRSSR 99
CL I P + V HIP C S ++ FL R SR
Sbjct: 577 CLVLCIFPFLPAVGVSTHIPLCILSPIITAFLCHRLSR 614
>AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A
protein.
Length = 1951
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = -1
Query: 307 YSWNCPLTN-RSTSEDLPTADSP---NNTSLNWQTFVCGAPLGLCAAPVLFVAISL 152
Y C L N + SE + A P N+TS + FV P L + PVL+V ++
Sbjct: 133 YQGRCRLRNLHNISEVISEAIEPRVSNDTSSSVVIFVGSGPANLSSEPVLYVGATI 188
>U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical
protein F07C3.10 protein.
Length = 562
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 289 LTNRSTSEDLPTADSPNNTSLNWQTF 212
LT+ S+S LPTAD+P + +W F
Sbjct: 217 LTDSSSSFVLPTADTPGINTKDWLGF 242
>Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical
protein C52E4.6a protein.
Length = 480
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 134 RSYNNREGYGDKQDRSRTEAQWRSTDK 214
R N+R+G GD++DR + R +K
Sbjct: 415 RRSNDRDGRGDRRDRDKDRGDRRKDEK 441
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 327 PRWCSPGTRGTVP*RIGAPARTCLPQTRPTTP 232
P C P VP + RTC P R TP
Sbjct: 861 PNVCPPQPANLVPVELAGNYRTCNPYARAGTP 892
>U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin
isoform 3 protein.
Length = 173
Score = 26.2 bits (55), Expect = 7.3
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +3
Query: 111 VAQEKVQNGATITGRDMATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVK 290
+++ KV TI G+ A+ R + P+T F+ + GE+ +GKS L F
Sbjct: 1 MSRSKVFFDITIGGK--ASGRIVMELYDDVVPKT-AGNFRALCTGENGIGKSGKPLHFKG 57
Query: 291 GQFH 302
+FH
Sbjct: 58 SKFH 61
>AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L
protein.
Length = 480
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 134 RSYNNREGYGDKQDRSRTEAQWRSTDK 214
R N+R+G GD++DR + R +K
Sbjct: 415 RRSNDRDGRGDRRDRDKDRGDRRKDEK 441
>AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical
protein Y75B12B.5 protein.
Length = 173
Score = 26.2 bits (55), Expect = 7.3
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +3
Query: 111 VAQEKVQNGATITGRDMATNRTGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVK 290
+++ KV TI G+ A+ R + P+T F+ + GE+ +GKS L F
Sbjct: 1 MSRSKVFFDITIGGK--ASGRIVMELYDDVVPKT-AGNFRALCTGENGIGKSGKPLHFKG 57
Query: 291 GQFH 302
+FH
Sbjct: 58 SKFH 61
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 254 GRQVLAGAPIRQGTVPRVPGEHHRGCVPHPGHSI 355
G+ A A I Q P + HR VP PGHSI
Sbjct: 380 GKAETAQAAI-QRIFPSIQATAHRLTVPMPGHSI 412
>Z46787-4|CAA86742.1| 166|Caenorhabditis elegans Hypothetical
protein C16C10.4 protein.
Length = 166
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 92 GDFVKICRPRKSSERSYNNREGYGDKQDRSRTE 190
GDFV + S R +NNRE GD+ D + +
Sbjct: 130 GDFVDVAISLPSQGRRFNNRE-QGDRFDHRQRQ 161
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 329 CVPHPGHSIR 358
CVPH GHSIR
Sbjct: 274 CVPHTGHSIR 283
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 329 CVPHPGHSIR 358
CVPH GHSIR
Sbjct: 287 CVPHTGHSIR 296
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 254 GRQVLAGAPIRQGTVPRVPGEHHRGCVPHPGHSI 355
G+ A A I Q P + HR VP PGHSI
Sbjct: 380 GKAETAQAAI-QRIFPSIQATAHRLTVPMPGHSI 412
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,984,250
Number of Sequences: 27780
Number of extensions: 186859
Number of successful extensions: 673
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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