Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0120
(658 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600... 58 5e-09
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 58 6e-09
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455... 57 1e-08
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 57 1e-08
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 53 2e-07
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99... 51 7e-07
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 48 5e-06
10_01_0318 + 3493913-3496976,3497064-3497392 31 1.1
03_02_0658 + 10228794-10228943,10229042-10229105,10229510-102298... 29 4.3
02_04_0655 + 24761323-24761424,24761565-24761675,24762361-247624... 29 4.3
03_05_0141 - 21210176-21212140 28 5.7
10_08_0288 + 16527666-16527837,16527915-16528132,16528491-165285... 28 7.5
05_05_0338 + 24204301-24206262,24206337-24206495,24206864-242070... 28 7.5
04_04_0754 + 27803143-27803517,27805441-27806832,27806910-278071... 28 7.5
04_03_0817 + 20003128-20003189,20003270-20003693,20003788-20004345 27 9.9
>10_08_0682 +
19858131-19858230,19858313-19858954,19859041-19860016,
19860105-19860147
Length = 586
Score = 58.4 bits (135), Expect = 5e-09
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Frame = -2
Query: 291 GHRQSAAKVFLHRQKKRQNLHILPDTYVTKILIDARTKTAYGVEY---------VRNRLK 139
G R +AA H + + L +L V++IL ++ Y V Y V++R+
Sbjct: 214 GQRHTAADFLRHARPR--GLTVLLYATVSRILFKSQDGVPYPVAYGVVFSDPLGVQHRVY 271
Query: 138 HIVLARKEVILSAGPIASPQLLMLSGVGPKKHLNSMGIPVLKDLPV 1
+ EVI+SAG + SPQLLMLSGVGP+ HL + GI V+ D P+
Sbjct: 272 LRDGDKNEVIVSAGTLGSPQLLMLSGVGPQAHLEAHGIEVIVDQPM 317
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 58.0 bits (134), Expect = 6e-09
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = -2
Query: 174 AYGVEYVRNRLK-HIVLARK--EVILSAGPIASPQLLMLSGVGPKKHLNSMGIPVLKDLP 4
A GV Y L+ H L R EVILSAG + SPQLL+LSG+GP L S+GIPV D+P
Sbjct: 279 ASGVVYQDRLLQQHHALLRPGGEVILSAGSLGSPQLLLLSGIGPANDLTSLGIPVFADVP 338
>04_04_0862 +
28843654-28844386,28844486-28844895,28844995-28845560,
28845737-28845803
Length = 591
Score = 56.8 bits (131), Expect = 1e-08
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Frame = -2
Query: 294 KGHRQSAAKVFLHRQKKRQNLHILPDTYVTKILIDART---KTAYGVEY--VRNRLKHIV 130
+G R +AA + R + + +L V KIL + R A+GV + ++
Sbjct: 210 EGRRHTAADLL--RYARTDGIDVLLRARVAKILFNVRAGRRPVAHGVVFHDSEGQMHRAY 267
Query: 129 LAR---KEVILSAGPIASPQLLMLSGVGPKKHLNSMGIPVLKDLP 4
L+ E+ILSAG + SPQLLMLSGVGP HL S GI ++ + P
Sbjct: 268 LSNGRGNEIILSAGAMGSPQLLMLSGVGPADHLRSFGITLVLNQP 312
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 56.8 bits (131), Expect = 1e-08
Identities = 50/144 (34%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Frame = -2
Query: 411 FRTKLIKAFLEAGRIFGHPTIDYNSPHQLGFGYVQAI-TTKGHRQSAAKVFLHRQKKRQN 235
++ L + LE G + P + H LG +I +G R +AA + R +
Sbjct: 167 WQAALRRGLLEIGVV---PDNGFTYDHILGTKVGGSIFDAQGRRHTAADLL--RYSRPDG 221
Query: 234 LHILPDTYVTKILIDAR-TK-TAYGVEYVRNRL-KHIVL----ARKEVILSAGPIASPQL 76
+ + V +I+ + TK A GV Y R H+ AR E+ILSAG + SPQL
Sbjct: 222 IDVFLRARVARIVFSRKGTKPVARGVLYHDARGGSHMAYLNHGARNEIILSAGALGSPQL 281
Query: 75 LMLSGVGPKKHLNSMGIPVLKDLP 4
LMLSGVGP HL GI ++ D P
Sbjct: 282 LMLSGVGPADHLEEFGISLVLDHP 305
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Frame = -2
Query: 291 GHRQSAAKVFLHRQKKRQNLHILPDTYVTKILIDA----RTKTAYGVEYVRNR--LKHIV 130
G+R +AA + NL +L VT+I+ + R GVE+ +H
Sbjct: 227 GYRHTAADLLA--AGNHNNLRVLLHASVTRIIFNTEQEHRKPRTIGVEFKDENGGQQHAF 284
Query: 129 LARK---EVILSAGPIASPQLLMLSGVGPKKHLNSMGIPVL 16
L R E+I+SAG I SPQLL+LSG+GP+K L I V+
Sbjct: 285 LTRNRDSEIIISAGAIGSPQLLLLSGIGPRKELKKHNISVV 325
>03_01_0127 +
988066-988171,988259-988881,988986-989396,989463-990037,
990137-990194
Length = 590
Score = 51.2 bits (117), Expect = 7e-07
Identities = 43/123 (34%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Frame = -2
Query: 357 PTIDYNSPHQLGFGYVQAITTKGHRQSAAKVFLHRQKKRQNLHILPDTYVTKILIDARTK 178
P Y H G I + R+ A FL R R+ L T T
Sbjct: 196 PDNGYTLEHVQGTKIGGTIFDRAGRRHTAADFLRRAHPRRLTVFLRAT-------GTATP 248
Query: 177 TAYGVEYV--RNRLKHIVL---ARKEVILSAGPIASPQLLMLSGVGPKKHLNSMGIPVLK 13
AYGV + H+ L A+ EVI++AG + SPQLLMLSGVGP+ L GI +
Sbjct: 249 VAYGVVFTDPAGVRHHVYLRGGAKSEVIVTAGTLGSPQLLMLSGVGPRGELEKHGILPVL 308
Query: 12 DLP 4
D P
Sbjct: 309 DQP 311
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -2
Query: 117 EVILSAGPIASPQLLMLSGVGPKKHLNSMGIPVL 16
E+I+SAG I SPQLL+LSG+GPK L S IPV+
Sbjct: 278 EIIVSAGAIGSPQLLLLSGIGPKNDLRSHKIPVV 311
>10_01_0318 + 3493913-3496976,3497064-3497392
Length = 1130
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 360 HPTIDYNSPHQLGFGYVQAITTKGHRQSAAKVFLHRQKKRQNLHILPDTYVTKILID 190
H +D+ HQ+ FG Q ++ H + +HR K N IL DT + L D
Sbjct: 941 HAALDWTVRHQIAFGVAQGLSYLHH--DCVPMIVHRDVKSSN--ILMDTELVPKLTD 993
>03_02_0658 +
10228794-10228943,10229042-10229105,10229510-10229805,
10230689-10230904,10231409-10231549,10232407-10232499,
10234010-10234108,10234198-10234227,10234274-10234360,
10234636-10234689,10234758-10234835,10235128-10235202,
10236265-10236356,10236433-10236490,10236590-10236664,
10236966-10237013,10239003-10239065,10239167-10239258,
10239693-10239761,10239867-10239930,10240007-10240072,
10240170-10240271
Length = 703
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -2
Query: 471 LTISNFEIYIPRIFVYLFIIFRTKLIKAFLEAGRIFGHPTIDYNSPHQLGFGYVQAIT 298
L I++ Y+P V+ F+I+ + L ++ L A I G P I + + ++ G +T
Sbjct: 535 LQINDISGYLPGRIVF-FLIWTSTLQRSILTAQPIIGFPKIQWRALDEINAGICDGMT 591
>02_04_0655 +
24761323-24761424,24761565-24761675,24762361-24762472,
24763049-24763113,24763727-24763804,24764550-24764624,
24764747-24764899,24764988-24765122,24765325-24765495
Length = 333
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -2
Query: 279 SAAKVFLHRQKKRQNLHILPDTYVT-KILIDARTKTAYG-VEYVRNRLKHIVLARKEVIL 106
S A + H+Q +R N+H + K I+ A G VE V+N LK++ + KE+++
Sbjct: 15 SVAGKWQHQQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVEEVKNTLKNVFPSEKEIVV 74
Query: 105 SAGPIA 88
+ +A
Sbjct: 75 KSQILA 80
>03_05_0141 - 21210176-21212140
Length = 654
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 318 GYVQAITTKGHRQSAAKVFLHRQKKRQNLHILPDTYVTKILI 193
GY QA G R+ A + L R KR+ H+ PD Y L+
Sbjct: 149 GYAQA----GRREEA--ILLFRDMKREGSHVAPDRYTFPALL 184
>10_08_0288 +
16527666-16527837,16527915-16528132,16528491-16528554,
16528749-16528821,16529294-16529371,16529573-16529730,
16530222-16530390,16530531-16530990,16531098-16531478,
16531834-16532037,16532318-16532451,16532937-16533120
Length = 764
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 57 GPKKHLNSMGIPVLKDL 7
GPK+HL +G+ +LKDL
Sbjct: 560 GPKQHLQMIGVQLLKDL 576
>05_05_0338 +
24204301-24206262,24206337-24206495,24206864-24207035,
24207544-24207842,24208301-24208355,24208438-24208487,
24208522-24208827
Length = 1000
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 90 LWDRLIELLLFVLVQCALICFV 155
+WD L +L L +LV CAL+ V
Sbjct: 96 VWDALHDLTLIILVVCALVSIV 117
>04_04_0754 +
27803143-27803517,27805441-27806832,27806910-27807164,
27807246-27807368,27807643-27808119,27808217-27808603
Length = 1002
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -2
Query: 531 GQETV*NHISMICTKYKQINLTISNFEIYIPRIFVYLFIIFRTKLIKAFLEAGRIFGHP 355
G E+ I + + + F I R+FV L II A+ AGR+ G+P
Sbjct: 553 GSESALAQIVRLVESAQMAKAPVQKFADQISRVFVPLVIILSLLTWLAWFLAGRLHGYP 611
>04_03_0817 + 20003128-20003189,20003270-20003693,20003788-20004345
Length = 347
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 239 CRFFCLCRNTFAALCRCPL 295
CR CLCR AA+ CP+
Sbjct: 315 CRHLCLCRGCEAAVDACPV 333
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,062,763
Number of Sequences: 37544
Number of extensions: 339570
Number of successful extensions: 575
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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