Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0120
(658 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase p... 103 7e-22
AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase p... 103 7e-22
BC114495-1|AAI14496.1| 332|Homo sapiens SLAMF6 protein protein. 30 8.3
BC113893-1|AAI13894.1| 331|Homo sapiens SLAM family member 6 pr... 30 8.3
BC090928-1|AAH90928.1| 271|Homo sapiens SLAMF6 protein protein. 30 8.3
AY358159-1|AAQ88526.1| 332|Homo sapiens TCOM protein. 30 8.3
AL138930-4|CAI15157.1| 331|Homo sapiens SLAM family member 6 pr... 30 8.3
AL138930-3|CAI15155.1| 332|Homo sapiens SLAM family member 6 pr... 30 8.3
AJ306388-1|CAC59750.1| 332|Homo sapiens NTB-A receptor protein. 30 8.3
AJ277141-1|CAC59749.1| 331|Homo sapiens activating NK receptor ... 30 8.3
>BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase
protein.
Length = 594
Score = 103 bits (246), Expect = 7e-22
Identities = 61/130 (46%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Frame = -2
Query: 390 AFLEAGRIFGHP-TIDYNSPHQLGFGYVQAITTKGHRQSAAKVFLHRQKKRQNLHILPDT 214
AFLEA + G+P T D N Q GFG++ +G R SAA +LH R NL +T
Sbjct: 201 AFLEATQQAGYPLTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAET 260
Query: 213 YVTKILIDARTKTAYGVEYVRNRLKHIVLARKEVILSAGPIASPQLLMLSGVGPKKHLNS 34
V+++L + A GVEYV+N H A KEVILS G I SPQLLMLSG+G L
Sbjct: 261 LVSRVLFEGTR--AVGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKK 318
Query: 33 MGIPVLKDLP 4
+GIPV+ LP
Sbjct: 319 LGIPVVCHLP 328
>AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase
protein.
Length = 482
Score = 103 bits (246), Expect = 7e-22
Identities = 61/130 (46%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
Frame = -2
Query: 390 AFLEAGRIFGHP-TIDYNSPHQLGFGYVQAITTKGHRQSAAKVFLHRQKKRQNLHILPDT 214
AFLEA + G+P T D N Q GFG++ +G R SAA +LH R NL +T
Sbjct: 89 AFLEATQQAGYPLTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAET 148
Query: 213 YVTKILIDARTKTAYGVEYVRNRLKHIVLARKEVILSAGPIASPQLLMLSGVGPKKHLNS 34
V+++L + A GVEYV+N H A KEVILS G I SPQLLMLSG+G L
Sbjct: 149 LVSRVLFEGTR--AVGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKK 206
Query: 33 MGIPVLKDLP 4
+GIPV+ LP
Sbjct: 207 LGIPVVCHLP 216
>BC114495-1|AAI14496.1| 332|Homo sapiens SLAMF6 protein protein.
Length = 332
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 478 LFVFCTNHTNVILNSFLSPLLVRG 549
LFVFC NV+ S L+PL+V G
Sbjct: 9 LFVFCFGPGNVVSQSSLTPLMVNG 32
>BC113893-1|AAI13894.1| 331|Homo sapiens SLAM family member 6
protein.
Length = 331
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 478 LFVFCTNHTNVILNSFLSPLLVRG 549
LFVFC NV+ S L+PL+V G
Sbjct: 9 LFVFCFGPGNVVSQSSLTPLMVNG 32
>BC090928-1|AAH90928.1| 271|Homo sapiens SLAMF6 protein protein.
Length = 271
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 478 LFVFCTNHTNVILNSFLSPLLVRG 549
LFVFC NV+ S L+PL+V G
Sbjct: 9 LFVFCFGPGNVVSQSSLTPLMVNG 32
>AY358159-1|AAQ88526.1| 332|Homo sapiens TCOM protein.
Length = 332
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 478 LFVFCTNHTNVILNSFLSPLLVRG 549
LFVFC NV+ S L+PL+V G
Sbjct: 9 LFVFCFGPGNVVSQSSLTPLMVNG 32
>AL138930-4|CAI15157.1| 331|Homo sapiens SLAM family member 6
protein.
Length = 331
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 478 LFVFCTNHTNVILNSFLSPLLVRG 549
LFVFC NV+ S L+PL+V G
Sbjct: 9 LFVFCFGPGNVVSQSSLTPLMVNG 32
>AL138930-3|CAI15155.1| 332|Homo sapiens SLAM family member 6
protein.
Length = 332
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 478 LFVFCTNHTNVILNSFLSPLLVRG 549
LFVFC NV+ S L+PL+V G
Sbjct: 9 LFVFCFGPGNVVSQSSLTPLMVNG 32
>AJ306388-1|CAC59750.1| 332|Homo sapiens NTB-A receptor protein.
Length = 332
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 478 LFVFCTNHTNVILNSFLSPLLVRG 549
LFVFC NV+ S L+PL+V G
Sbjct: 9 LFVFCFGPGNVVSQSSLTPLMVNG 32
>AJ277141-1|CAC59749.1| 331|Homo sapiens activating NK receptor
protein.
Length = 331
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 478 LFVFCTNHTNVILNSFLSPLLVRG 549
LFVFC NV+ S L+PL+V G
Sbjct: 9 LFVFCFGPGNVVSQSSLTPLMVNG 32
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,708,455
Number of Sequences: 237096
Number of extensions: 1932600
Number of successful extensions: 6668
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6666
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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