Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0120
         (658 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.   108   5e-26
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.1  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    23   2.6  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    23   2.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   7.8  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score =  108 bits (259), Expect = 5e-26
 Identities = 62/136 (45%), Positives = 85/136 (62%)
 Frame = -2

Query: 411 FRTKLIKAFLEAGRIFGHPTIDYNSPHQLGFGYVQAITTKGHRQSAAKVFLHRQKKRQNL 232
           F  K++KA  EAG  FG  + D +     GF   Q I+  G R S+A+ F+   + R NL
Sbjct: 223 FAWKILKAAEEAG--FG-VSEDLSGDRINGFTVAQTISRNGVRLSSARAFITPFENRSNL 279

Query: 231 HILPDTYVTKILIDARTKTAYGVEYVRNRLKHIVLARKEVILSAGPIASPQLLMLSGVGP 52
           H++ +  VTK+      K A GV  + N  + I+ AR+EVILSAG + +PQLLMLSG+GP
Sbjct: 280 HVIVNATVTKVR--TLNKRATGVNVLINGRRRIIFARREVILSAGSVNTPQLLMLSGIGP 337

Query: 51  KKHLNSMGIPVLKDLP 4
           K+HL S+GIPV+ DLP
Sbjct: 338 KEHLRSLGIPVVVDLP 353


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 496 LYKIQTNKPNYFKLRNLYSTYFCI 425
           L K   +K    KLRN++S+ FCI
Sbjct: 202 LAKAAASKAALAKLRNVHSSSFCI 225


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 519 QFLVPIISTRAALKISGINEVTQHYYLKMY 608
           QFLVP++    +     INE+   ++L+ Y
Sbjct: 297 QFLVPMLQGFPSNSWVAINELQDSFWLEQY 326


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 519 QFLVPIISTRAALKISGINEVTQHYYLKMY 608
           QFLVP++    +     INE+   ++L+ Y
Sbjct: 265 QFLVPMLQGFPSNSWVAINELQDSFWLEQY 294


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 237 NLHILPDTYVTK 202
           N++ILPD Y TK
Sbjct: 234 NVYILPDPYNTK 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,960
Number of Sequences: 438
Number of extensions: 4493
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)