Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0119
         (527 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 225 LKAQCLFCRQLTVFPGYTISSDTIFVFVR 139
           LKAQ    R  TV  G T+   T+F F R
Sbjct: 164 LKAQLWQNRYETVAHGMTVQKTTLFFFNR 192


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 241 KMNSEARSCTGSLAVHPRSRDIKIANFSI 327
           K ++ ++S  G     PR+  +K+  FSI
Sbjct: 44  KRSTSSQSTEGENDARPRASQVKLNVFSI 72


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 307 KIANFSITFYGSEL 348
           KIANF +TF+   L
Sbjct: 64  KIANFMLTFFNVSL 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,007
Number of Sequences: 336
Number of extensions: 1952
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)