Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0117
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11126-5|CAA77469.1|  109|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z78064-1|CAB01509.1|  313|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z69793-2|CAA93671.1|  136|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z11126-5|CAA77469.1|  109|Caenorhabditis elegans Hypothetical
           protein ZK643.7 protein.
          Length = 109

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -1

Query: 453 DIDLVLQGG*RCSLCDFYRLLYTPE 379
           D + + +GG RC +  F+++ +TPE
Sbjct: 36  DFEYISKGGIRCCIIHFFKIYFTPE 60


>Z78064-1|CAB01509.1|  313|Caenorhabditis elegans Hypothetical
           protein F57B1.3 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
 Frame = -2

Query: 560 GVLPVLGRIS------KPRTSKCHHTAYFCPESVLSSGFKGGISTSCCKVGDG 420
           GV  V GRI       K R SK    +Y    +V   GF G    SCC  G G
Sbjct: 75  GVSGVAGRIKRESYHRKARASKVRRQSYGADAAV--GGFGGSAGGSCCSCGTG 125


>Z69793-2|CAA93671.1|  136|Caenorhabditis elegans Hypothetical
           protein R03A10.2 protein.
          Length = 136

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 9/18 (50%), Positives = 16/18 (88%)
 Frame = -3

Query: 298 FVN*LLKRCFRIYFKLLI 245
           F+  ++++CFRIYFKL++
Sbjct: 109 FLETIVRQCFRIYFKLIL 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,033,719
Number of Sequences: 27780
Number of extensions: 333344
Number of successful extensions: 699
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)