Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0117
         (798 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   4.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   7.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   7.6  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   7.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 722 NCYWFFLAYS*PYWL 766
           N Y+FFL  + P+WL
Sbjct: 230 NTYYFFLRQAFPFWL 244


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 722 NCYWFFLAYS*PYWL 766
           N Y+FFL  + P+WL
Sbjct: 230 NTYYFFLRQAFPFWL 244


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 411 KVNTVTHLATRGRYPTLKTGTKD*FGAEIGSMVALTCAWLR 533
           KVN+  + A   R  T+K G       E+     +T  WL+
Sbjct: 803 KVNSSPYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVTWLK 843


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 411 KVNTVTHLATRGRYPTLKTGTKD*FGAEIGSMVALTCAWLR 533
           KVN+  + A   R  T+K G       E+     +T  WL+
Sbjct: 799 KVNSSPYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVTWLK 839


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +3

Query: 105 VLFIFDAETLFSN-LVLFFTIHRQYVVNVLMY 197
           +LF+F   T+F N LV+   +  +Y+     Y
Sbjct: 51  LLFLFSVATVFGNTLVILAVVRERYLHTATNY 82


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +2

Query: 722 NCYWFFLAYS*PYWLKTN 775
           N Y++++    PYW+ ++
Sbjct: 231 NAYYYYMREMLPYWMSSS 248


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +2

Query: 722 NCYWFFLAYS*PYWLKTN 775
           N Y++++    PYW+ ++
Sbjct: 231 NAYYYYMREMLPYWMSSS 248


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 687 KRVTELSSFIPSAAWPVLSSPPY 619
           K   +LS +  S  W +++ P Y
Sbjct: 187 KNFVDLSDYWKSGTWDIINVPAY 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,309
Number of Sequences: 438
Number of extensions: 4355
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)