Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0115
         (713 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3LN84 Cluster: Transmembrane protein; n=1; Pichia stip...    33   5.3  
UniRef50_Q4N8D8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ...    33   9.2  

>UniRef50_A3LN84 Cluster: Transmembrane protein; n=1; Pichia
           stipitis|Rep: Transmembrane protein - Pichia stipitis
           (Yeast)
          Length = 565

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = -2

Query: 199 NILISTHNSLVVRDHEK*RIPKAGGNTSTYSYNDNENDKNSGSSHKSSFN 50
           ++   TH+   +  H      +   N + Y+YNDN+ND N+ +++ ++ N
Sbjct: 401 SVTTRTHSDNTLEIHNSQLENENSNNENNYNYNDNDNDNNNDNANNTNNN 450


>UniRef50_Q4N8D8 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 1095

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -2

Query: 130 GGNTSTYSYNDNENDKNSGSSHKSSFN 50
           G N+   + NDN+ DKNSG S  SSFN
Sbjct: 888 GSNSDDSAENDNKLDKNSGDSSCSSFN 914


>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein;
           n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
           helicase family protein - Trichomonas vaginalis G3
          Length = 865

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -2

Query: 130 GGNTSTYSYNDNENDKNSGSSHKSSFNY 47
           GGN +  SYN N ND NS SS+K S N+
Sbjct: 393 GGNDNGNSYNQNYND-NSSSSNKKSSNF 419


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,292,093
Number of Sequences: 1657284
Number of extensions: 11457784
Number of successful extensions: 30666
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30359
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)