Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0115
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.5  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.9  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 459 FTSLVKCLLVSGNRIHGFTL 400
           F  +V C+L+S   + GFTL
Sbjct: 216 FNLIVPCVLISSMALLGFTL 235


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 459 FTSLVKCLLVSGNRIHGFTL 400
           F  +V C+L+S   + GFTL
Sbjct: 216 FNLIVPCVLISSMALLGFTL 235


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 459 FTSLVKCLLVSGNRIHGFTL 400
           F  +V C+L+S   + GFTL
Sbjct: 216 FNLIVPCVLISSMALLGFTL 235


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 459 FTSLVKCLLVSGNRIHGFTL 400
           F  +V C+L+S   + GFTL
Sbjct: 216 FNLIVPCVLISSMALLGFTL 235


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 459 FTSLVKCLLVSGNRIHGFTL 400
           F  +V C+L+S   + GFTL
Sbjct: 216 FNLIVPCVLISSMALLGFTL 235


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 433 SFRKPHSWFYLIVAVSIWTLTMYI 362
           SF K + + Y IVAVS+    +YI
Sbjct: 38  SFYKIYKYTYNIVAVSLTAYMVYI 61


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 70  LIPSFCHFHCHYTSMYLYY 126
           L+  FC+F   +T  Y+YY
Sbjct: 143 LVFVFCYFIYLFTVYYIYY 161


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -3

Query: 180 TIP*SSATTKNKEFQKPEVIQVHTRIXXXXXXXTRDQAIR 61
           +IP +S+T +NK F   +V+    R        T+D+  R
Sbjct: 89  SIPGASSTPENKTFPSIQVMGYQGRAVVVVSCVTKDEPFR 128


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 596 IINPSKFILLLSLIFNVYFIL 658
           I N   +I+++S   N+YFI+
Sbjct: 158 IDNNMSYIIIVSFATNLYFII 178


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 76  PSFCHFHCHY 105
           P F  FHCH+
Sbjct: 664 PGFWLFHCHF 673


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,497
Number of Sequences: 336
Number of extensions: 3392
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)