Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0114
         (805 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7YXB0 Cluster: Putative uncharacterized protein srh-25...    33   6.4  
UniRef50_A0EE02 Cluster: Cation-transporting ATPase; n=2; Parame...    33   6.4  
UniRef50_A6D2W4 Cluster: Putative inner membrane protein; n=5; V...    33   8.4  

>UniRef50_Q7YXB0 Cluster: Putative uncharacterized protein srh-255;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein srh-255 - Caenorhabditis elegans
          Length = 329

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = -3

Query: 323 QVRSNMKRLIPLYFMCYIFVYTISAI**IICPTTYETIKIYRRLYR*DAYNYIFVSTRID 144
           QV+S   R +   F+  I+V     +  ++CP TY    ++   Y   A N +F+S    
Sbjct: 220 QVKSTQTRKMEKKFLLAIYVQAGVVMIALLCPATYVIFSVFNDYYNQAANNCMFISFAFH 279

Query: 143 KIISIL 126
            I S L
Sbjct: 280 GIFSTL 285


>UniRef50_A0EE02 Cluster: Cation-transporting ATPase; n=2;
           Paramecium tetraurelia|Rep: Cation-transporting ATPase -
           Paramecium tetraurelia
          Length = 1139

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +3

Query: 378 VIMYCSRV--FLGMVKRYSVMICLTNSLMLFYNGGGNRRATFLLAKLFKTNCPILLID 545
           +  +CS +  F    +RY+ +I +T+ + +F      RR+ + L +L K N P+ +ID
Sbjct: 182 IFQFCSVLLWFWASYQRYATVILITSLISIFMTLYEQRRSFYRLQQLSKFNIPVQIID 239


>UniRef50_A6D2W4 Cluster: Putative inner membrane protein; n=5;
           Vibrionaceae|Rep: Putative inner membrane protein -
           Vibrio shilonii AK1
          Length = 694

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = +3

Query: 363 SIFTLVIMYCSRVFLGMVKRYSVMI-CLTNSLMLFYNGGGNRRATFLLAKLFKT--NCPI 533
           +I+TL+I+      L +++RYS+ I C+T  L+L Y+   ++   F   +L        I
Sbjct: 434 AIYTLIIVLLPVAMLNIMRRYSLAIGCITALLILVYHAMAHQGLNFAAPRLIDNLLGGVI 493

Query: 534 LLIDYNV 554
           +L+ Y+V
Sbjct: 494 VLLGYSV 500


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,700,558
Number of Sequences: 1657284
Number of extensions: 14180417
Number of successful extensions: 30434
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30424
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)