Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0114
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81517-7|CAE11306.1|  329|Caenorhabditis elegans Hypothetical pr...    33   0.18 
Z81117-9|CAB03317.2|  333|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.     29   3.9  
Z71185-8|CAI46564.1|  158|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z81088-8|CAB03130.2|  332|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>Z81517-7|CAE11306.1|  329|Caenorhabditis elegans Hypothetical
           protein F28B1.8 protein.
          Length = 329

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = -3

Query: 323 QVRSNMKRLIPLYFMCYIFVYTISAI**IICPTTYETIKIYRRLYR*DAYNYIFVSTRID 144
           QV+S   R +   F+  I+V     +  ++CP TY    ++   Y   A N +F+S    
Sbjct: 220 QVKSTQTRKMEKKFLLAIYVQAGVVMIALLCPATYVIFSVFNDYYNQAANNCMFISFAFH 279

Query: 143 KIISIL 126
            I S L
Sbjct: 280 GIFSTL 285


>Z81117-9|CAB03317.2|  333|Caenorhabditis elegans Hypothetical
           protein T06E6.8 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = -2

Query: 339 LVIYTPS*KQYETTYSVIFYVLYFCLYNFGN-IINNMPH-YVRNNQNLSTAISIGRLQLY 166
           L +Y  S   + T ++   Y+LY C  N+ N I NN    +V +  ++ST I +   + Y
Sbjct: 236 LALYAQSGAFFLTCFTPYVYILYSCFTNYYNPIANNFIFIFVASRGSISTIILLSAYKPY 295


>Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical
           protein K12F2.2a protein.
          Length = 1066

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = +3

Query: 555 FLELSVSIF*YSNYSTTMSA*PSRALRIAQHSLMLFSHPNTKSYLYECAKSISR*TIFVF 734
           FL++ +     +N   TM A  S  L + Q +  + S  ++   L  CA S SR T FVF
Sbjct: 242 FLDMGIGERNSTNGGMTMPALGSILLAMVQRNKHIPSRDSSVCQLIRCALSTSRFTTFVF 301


>Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical
           protein K12F2.2a protein.
          Length = 1066

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = +3

Query: 555 FLELSVSIF*YSNYSTTMSA*PSRALRIAQHSLMLFSHPNTKSYLYECAKSISR*TIFVF 734
           FL++ +     +N   TM A  S  L + Q +  + S  ++   L  CA S SR T FVF
Sbjct: 242 FLDMGIGERNSTNGGMTMPALGSILLAMVQRNKHIPSRDSSVCQLIRCALSTSRFTTFVF 301


>AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.
          Length = 1066

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = +3

Query: 555 FLELSVSIF*YSNYSTTMSA*PSRALRIAQHSLMLFSHPNTKSYLYECAKSISR*TIFVF 734
           FL++ +     +N   TM A  S  L + Q +  + S  ++   L  CA S SR T FVF
Sbjct: 242 FLDMGIGERNSTNGGMTMPALGSILLAMVQRNKHIPSRDSSVCQLIRCALSTSRFTTFVF 301


>Z71185-8|CAI46564.1|  158|Caenorhabditis elegans Hypothetical
           protein C35A5.11 protein.
          Length = 158

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 1   RTSRWVDKHR-CATLTRQRQCRRVNVFDLYR*WNCRCIELKF 123
           R +RW  +H+ C T T  R  RR + F L+R  +CR   + F
Sbjct: 90  RITRWPQQHKTCFTHTTYRLERREDNFYLWRSGDCRTSTIGF 131


>Z81088-8|CAB03130.2|  332|Caenorhabditis elegans Hypothetical
           protein F53F1.8 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 658 CLVTLI--PKVIYTNVQSQYLDKRFSYFSYVFLMTFF 762
           CLV LI    V+Y+   +QY++KR  YF Y  L   +
Sbjct: 251 CLVELIYFAFVVYSLQINQYMNKRIFYFLYNILCVIY 287


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,638,714
Number of Sequences: 27780
Number of extensions: 364597
Number of successful extensions: 879
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)