Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0112
(713 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 42 4e-04
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 39 0.004
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 39 0.004
At1g43860.1 68414.m05053 expressed protein 32 0.43
At5g08210.1 68418.m00961 expressed protein 30 1.8
At3g25882.1 68416.m03225 NPR1/NIM1-interacting protein 2 (NIMIN-... 29 2.3
At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH) domain... 28 5.3
At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH) domain... 28 5.3
At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH) domain... 28 5.3
At4g31480.1 68417.m04472 coatomer beta subunit, putative / beta-... 28 7.1
At3g14220.1 68416.m01797 GDSL-motif lipase/hydrolase family prot... 28 7.1
At1g64050.1 68414.m07255 expressed protein 28 7.1
At4g31490.1 68417.m04473 coatomer beta subunit, putative / beta-... 27 9.3
At1g56450.1 68414.m06492 20S proteasome beta subunit G1 (PBG1) (... 27 9.3
>At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 395
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 352 GNCCSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFG 462
G C+ C FE A+Q HYK WH +NLKRK+ G
Sbjct: 3 GLACNSCNKD-FEDDAEQKFHYKSEWHRYNLKRKIAG 38
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 352 GNCCSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFG 462
G C+ C + F+ ++ HYK WH +NLKRK+ G
Sbjct: 3 GLTCNACNM-EFKDEEERNLHYKSDWHRYNLKRKVAG 38
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 352 GNCCSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFG 462
G C+ C + F+ ++ HYK WH +NLKRK+ G
Sbjct: 3 GLTCNACNM-EFKDEEERNLHYKSDWHRYNLKRKVAG 38
>At1g43860.1 68414.m05053 expressed protein
Length = 370
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 352 GNCCSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFGKSPLS 477
G CS C E + Q H K WH NLKRK P+S
Sbjct: 308 GTKCSTCNTFVGEAK-QYREHCKSDWHKHNLKRKTRKLPPIS 348
>At5g08210.1 68418.m00961 expressed protein
Length = 67
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 568 FAAATRHCKAFFTNHYGQVF--CIYRCILHHKKEELSTDGDGSAWVE 702
F+A + A TN F C + HHKK S +GD S+W +
Sbjct: 9 FSATAKITTASATNMLSHPFNRCCHHYYGHHKKIHASGNGDSSSWYD 55
>At3g25882.1 68416.m03225 NPR1/NIM1-interacting protein 2 (NIMIN-2)
identical to cDNA NIMIN-2 protein (nimin-2
gene)GI:12057155
Length = 122
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 178 KPEAVKTKIVKVYEIDEFQKLLKGVHVAACMITESHNVIDE 300
KP + V E+DEF K+L+ VHVA + + + + E
Sbjct: 24 KPSTEVVRTVTEEEVDEFFKILRRVHVATRTVAKVNGGVAE 64
>At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 415 NEPFAAHGSRMDPLRNTNNNYHQ 347
NEP+ HGS + L + NYH+
Sbjct: 36 NEPWGPHGSLLADLAQASRNYHE 58
>At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 415 NEPFAAHGSRMDPLRNTNNNYHQ 347
NEP+ HGS + L + NYH+
Sbjct: 36 NEPWGPHGSLLADLAQASRNYHE 58
>At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 415 NEPFAAHGSRMDPLRNTNNNYHQ 347
NEP+ HGS + L + NYH+
Sbjct: 36 NEPWGPHGSLLADLAQASRNYHE 58
>At4g31480.1 68417.m04472 coatomer beta subunit, putative /
beta-coat protein, putative / beta-COP, putative similar
to Coatomer beta subunit (Beta-coat protein) (Beta-COP)
from {Rattus norvegicus} SP|P23514, {Mus musculus}
SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 971
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 127 NVDIIFQDQQSEPIMALKPEAVKTKIVKVYEIDEF-QKLLKGVHVAACMITE 279
++D+I +E + LK E VKT+ ++ + E+ Q L++ +H A E
Sbjct: 363 SLDLITHHNINEVVQMLKKEVVKTQSGELEKNGEYRQMLIQAIHACAVKFPE 414
>At3g14220.1 68416.m01797 GDSL-motif lipase/hydrolase family protein
similar to myrosinase-associated proteins GI:1769968,
GI:1769970 from [Brassica napus]; contains InterPro
Entry IPR001087 Lipolytic enzyme, G-D-S-L family;
contains 1 predicted transmembrane domain;
Length = 363
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 307 VLRRLNALTLNGASDGNCCSCCGVG 381
+LRR+N +L+G +D SCCG G
Sbjct: 268 ILRRINEPSLHGYTD-TTTSCCGTG 291
>At1g64050.1 68414.m07255 expressed protein
Length = 668
Score = 27.9 bits (59), Expect = 7.1
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = -2
Query: 544 CPPLLP--QTHCLIHLLSENYTG-QWIMEIFQIVSSSS*KCA-SDAYNEPFAAHGSRMDP 377
CP LL +T C I + S N+ I+ + +S S K S +P H + +
Sbjct: 509 CPQLLEAARTLCDIAVQSANHDNPNGILRWPKKLSQKSMKARKSKLIEKPLERHRTTVSS 568
Query: 376 LR-NTNNNYHQKHHLRLKH*GDARHSVHQ*H 287
+ N++NN + K+H+R + H H H
Sbjct: 569 IDLNSSNNNNNKNHVRKDSAAEHNHHHHHHH 599
>At4g31490.1 68417.m04473 coatomer beta subunit, putative /
beta-coat protein, putative / beta-COP, putative similar
to Coatomer beta subunit (Beta-coat protein) (Beta-COP)
from {Rattus norvegicus} SP|P23514, {Mus musculus}
SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 948
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 130 VDIIFQDQQSEPIMALKPEAVKTKIVKVYEIDEF-QKLLKGVHVAACMITE 279
+D+I +E + LK E VKT+ ++ + E+ Q L++ +H A E
Sbjct: 341 LDLITHHNINEVVQMLKKEVVKTQSGELEKNGEYRQMLIQAIHACAVKFPE 391
>At1g56450.1 68414.m06492 20S proteasome beta subunit G1 (PBG1)
(PRCH) identical to 20S proteasome beta subunit (PBG1)
GI:3421123 [Arabidopsis thaliana]; identical to cDNA
proteasome subunit prch GI:2511597
Length = 246
Score = 27.5 bits (58), Expect = 9.3
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Frame = +1
Query: 268 MITESHNVIDEQSVLRRLNALTLNGA--SDGNCCSCCGVGPFETRAQQTAHYKHH--WHT 435
++ S + D Q +LR L+ LTLN DGN + + TR K + W+T
Sbjct: 73 LLGASGEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNT 132
Query: 436 FNLKRKLFGKSPLSI 480
L GKS L +
Sbjct: 133 LVLGGVKNGKSYLGM 147
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,777,821
Number of Sequences: 28952
Number of extensions: 285958
Number of successful extensions: 747
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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