Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0111
(681 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g47120.1 68418.m05809 Bax inhibitor-1 putative / BI-1 putativ... 89 3e-18
At4g17580.1 68417.m02628 Bax inhibitor-1 family protein / BI-1 f... 65 4e-11
At5g47130.1 68418.m05810 Bax inhibitor-1 family / BI-1 family si... 60 1e-09
At1g79360.1 68414.m09248 transporter-related low similarity to S... 33 0.23
At3g26570.2 68416.m03317 phosphate transporter family protein co... 30 1.2
At3g26570.1 68416.m03316 phosphate transporter family protein co... 30 1.2
At5g16150.3 68418.m01888 hexose transporter, putative strong sim... 29 2.8
At5g16150.2 68418.m01887 hexose transporter, putative strong sim... 29 2.8
At5g16150.1 68418.m01886 hexose transporter, putative strong sim... 29 2.8
At3g09990.1 68416.m01199 equilibrative nucleoside transporter, p... 28 5.0
At5g26710.1 68418.m03168 glutamate-tRNA ligase, putative / gluta... 28 6.6
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 28 6.6
At2g42710.1 68415.m05289 ribosomal protein L1 family protein 27 8.7
>At5g47120.1 68418.m05809 Bax inhibitor-1 putative / BI-1 putative
SP:Q9LD45: Bax inhibitor-1 (BI-1) (AtBI-1). [Mouse-ear
cress] {Arabidopsis thaliana}
Length = 247
Score = 89.0 bits (211), Expect = 3e-18
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Frame = +3
Query: 204 RLEPPVRQHLKNVYATLMMTCVSASAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNG 383
++ P V+ HLK VY TL V+++ G Y+ + G L+ I G M+ L++ P
Sbjct: 27 QISPAVQNHLKRVYLTLCCALVASAFGAYLHVLWNI-GGILTTIGCIGTMIWLLSCPPYE 85
Query: 384 KNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAMLAERG 563
RL L + G S+GPL++ VDPSI+ITA +GT + FVCFSAAAMLA R
Sbjct: 86 HQK--RLSLLFVSAVLEGASVGPLIKVAIDVDPSILITAFVGTAIAFVCFSAAAMLARRR 143
Query: 564 SWXXXXXXXXXXXXS-MSLMTLVNLFMQSHFLYQAHLYLG 680
+ M L ++F S +++ LY G
Sbjct: 144 EYLYLGGLLSSGLSMLMWLQFASSIFGGSASIFKFELYFG 183
>At4g17580.1 68417.m02628 Bax inhibitor-1 family protein / BI-1
family protein similar to SP|Q9LD45 Bax inhibitor-1
(BI-1) (AtBI-1) {Arabidopsis thaliana}; contains Pfam
profile PF01027: Uncharacterized protein family UPF0005
Length = 247
Score = 65.3 bits (152), Expect = 4e-11
Identities = 40/108 (37%), Positives = 61/108 (56%)
Frame = +3
Query: 237 NVYATLMMTCVSASAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLL 416
++Y TL ++++ G Y+ M G +S + +G+M+ L T N+ L L
Sbjct: 42 DLYLTLFFALLASAIGAYIHMVWNI-GGNVSTLGFSGIMIWLRFTL---YEPNM-LYLLF 96
Query: 417 GFGLTSGMSMGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAMLAER 560
F L G S+GP++ V D S+++TA +GT + FVCFSAAAMLA R
Sbjct: 97 LFALLKGASVGPMIMLVIDFDSSVLVTAFVGTAVAFVCFSAAAMLATR 144
>At5g47130.1 68418.m05810 Bax inhibitor-1 family / BI-1 family
similar to SP|Q9LD45 Bax inhibitor-1 (BI-1) (AtBI-1)
{Arabidopsis thaliana}
Length = 187
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +3
Query: 396 LRLGYLLGFGLTSGMSMGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAMLAER 560
+R LL FG+ G S+GP ++ +D SI+ITA LGT ++F CFSA AMLA R
Sbjct: 32 IRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARR 86
>At1g79360.1 68414.m09248 transporter-related low similarity to
SP|O76082 Organic cation/carnitine transporter 2 (Solute
carrier family 22, member 5) (High-affinity
sodium-dependent carnitine cotransporter) {Homo
sapiens}; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 527
Score = 32.7 bits (71), Expect = 0.23
Identities = 27/105 (25%), Positives = 43/105 (40%)
Frame = +3
Query: 255 MMTCVSASAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTS 434
M+T S + VY + RF GF A +G ++++T GK R+G + FG
Sbjct: 157 MLTVFSPNIWVYAVL--RFVNGFGRATIGT--CALVLSTELVGKKWRGRVGIMSFFGFML 212
Query: 435 GMSMGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAMLAERGSW 569
G PL+ Y++ I+ A + C + E W
Sbjct: 213 GFLSLPLMAYMNRGSSWRILYAWTSIPTIIYCVLVRFFVCESPRW 257
>At3g26570.2 68416.m03317 phosphate transporter family protein
contains Pfam profile: PF01384 phosphate transporter
family
Length = 587
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 315 AGFLSAIVGAGLMLMLIATPD-NGKNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPSII 491
AG LS++ AG L + + T+ +G ++GFGL G + ++ V S +
Sbjct: 237 AGLLSSLAAAGTWLQVASYYGWPVSTTHCIVGSMVGFGLVYGGAGAVFWSSLAKVASSWV 296
Query: 492 ITALLGTTLVFVCF 533
I+ +LG + F+ +
Sbjct: 297 ISPILGALVSFLVY 310
>At3g26570.1 68416.m03316 phosphate transporter family protein
contains Pfam profile: PF01384 phosphate transporter
family
Length = 613
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 315 AGFLSAIVGAGLMLMLIATPD-NGKNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPSII 491
AG LS++ AG L + + T+ +G ++GFGL G + ++ V S +
Sbjct: 263 AGLLSSLAAAGTWLQVASYYGWPVSTTHCIVGSMVGFGLVYGGAGAVFWSSLAKVASSWV 322
Query: 492 ITALLGTTLVFVCF 533
I+ +LG + F+ +
Sbjct: 323 ISPILGALVSFLVY 336
>At5g16150.3 68418.m01888 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 29.1 bits (62), Expect = 2.8
Identities = 29/97 (29%), Positives = 44/97 (45%)
Frame = +3
Query: 261 TCVSASAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGM 440
T S + G D F R + L AI A + L AT + + + +G LL G+ G+
Sbjct: 158 TVGSFTGGALADKFGRTRTFQLDAIPLA-IGAFLCATAQSVQT--MIVGRLLA-GIGIGI 213
Query: 441 SMGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAML 551
S + Y+S + P+ I AL +F+C A L
Sbjct: 214 SSAIVPLYISEISPTEIRGALGSVNQLFICIGILAAL 250
>At5g16150.2 68418.m01887 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 29.1 bits (62), Expect = 2.8
Identities = 29/97 (29%), Positives = 44/97 (45%)
Frame = +3
Query: 261 TCVSASAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGM 440
T S + G D F R + L AI A + L AT + + + +G LL G+ G+
Sbjct: 158 TVGSFTGGALADKFGRTRTFQLDAIPLA-IGAFLCATAQSVQT--MIVGRLLA-GIGIGI 213
Query: 441 SMGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAML 551
S + Y+S + P+ I AL +F+C A L
Sbjct: 214 SSAIVPLYISEISPTEIRGALGSVNQLFICIGILAAL 250
>At5g16150.1 68418.m01886 hexose transporter, putative strong
similarity to hexose transporter [Arabidopsis thaliana]
GI:8347250; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 546
Score = 29.1 bits (62), Expect = 2.8
Identities = 29/97 (29%), Positives = 44/97 (45%)
Frame = +3
Query: 261 TCVSASAGVYVDMFTRFQAGFLSAIVGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGM 440
T S + G D F R + L AI A + L AT + + + +G LL G+ G+
Sbjct: 158 TVGSFTGGALADKFGRTRTFQLDAIPLA-IGAFLCATAQSVQT--MIVGRLLA-GIGIGI 213
Query: 441 SMGPLLEYVSVVDPSIIITALLGTTLVFVCFSAAAML 551
S + Y+S + P+ I AL +F+C A L
Sbjct: 214 SSAIVPLYISEISPTEIRGALGSVNQLFICIGILAAL 250
>At3g09990.1 68416.m01199 equilibrative nucleoside transporter,
putative (ENT2) identical to putative equilibrative
nucleoside transporter ENT2 [Arabidopsis thaliana]
GI:16518991; contains similarity to SWISS-PROT:Q14542
equilibrative nucleoside transporter 2 (Equilibrative
nitrobenzylmercaptopurine riboside-insensitive
nucleoside transporter, Equilibrative NBMPR-insensitive
nucleoside transporter, Nucleoside transporter, ei-type,
36 kDa nucleolar protein HNP36, Hydrophobic nucleolar
protein, 36 kDa, Delayed-early response protein 12)
[Homo sapiens]; contains Pfam profile PF01733:
Nucleoside transporter
Length = 417
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 354 LMLIATPDNGKNTNLRLGYLLGFG-LTSGMSMGPLLEYVSVVDPSIIITALLGTTLVFVC 530
++ + T GKN L + +LLG G L + SM +++Y + + P + +L T+++
Sbjct: 5 ILAVTTNPKGKNYALAVCWLLGVGCLLAWNSMLTIVDYYAYLFPWYHPSRIL--TIIYQS 62
Query: 531 FSAAAM 548
FS A+
Sbjct: 63 FSIGAL 68
>At5g26710.1 68418.m03168 glutamate-tRNA ligase, putative /
glutamyl-tRNA synthetase, putatuve / GluRS, putative
identical to gi:3435196
Length = 719
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 521 YQGSAEQSSYYDRWVNYTDIFKQGTHAHA*C 429
Y +A SS D WV+Y +F G+ C
Sbjct: 71 YGNNAFDSSQIDEWVDYASVFSSGSEFENAC 101
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 625 KVISDIDVNSVINVPPRNSQLPRSASIAAAEKHTNTRVVPSRAVIMIDGSTT 470
+V I NS ++ P + S+ I AAE T TRV S +I +TT
Sbjct: 1638 RVARSIASNSQVSTKPTDMVTEPSSGIPAAEPSTMTRVPSSTPLIKSPVATT 1689
>At2g42710.1 68415.m05289 ribosomal protein L1 family protein
Length = 415
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 336 VGAGLMLMLIATPDNGKNTNLRLGYLLGFGLTSGMSMG 449
VGA + +L+A P K T+ GY+ F L S M G
Sbjct: 357 VGAFMNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGKG 394
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,680,514
Number of Sequences: 28952
Number of extensions: 280892
Number of successful extensions: 647
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -