Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0110
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016011-1|AAV36896.1|  652|Drosophila melanogaster RE22983p pro...    29   7.9  
AY058555-1|AAL13784.1|  345|Drosophila melanogaster LD24810p pro...    29   7.9  
AE014297-3439|AAN13972.1|  673|Drosophila melanogaster CG5410-PE...    29   7.9  
AE014297-3438|AAN13971.1|  652|Drosophila melanogaster CG5410-PD...    29   7.9  

>BT016011-1|AAV36896.1|  652|Drosophila melanogaster RE22983p
           protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 278 VATSIDKNKKRFDHLSYLYYYCNYFKIITPRLF 180
           V T  D +++R D+L     +C+ +K++ P LF
Sbjct: 556 VGTKCDMDERRQDYLMQPSEFCDKYKLLPPHLF 588


>AY058555-1|AAL13784.1|  345|Drosophila melanogaster LD24810p
           protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 278 VATSIDKNKKRFDHLSYLYYYCNYFKIITPRLF 180
           V T  D +++R D+L     +C+ +K++ P LF
Sbjct: 249 VGTKCDMDERRQDYLMQPSEFCDKYKLLPPHLF 281


>AE014297-3439|AAN13972.1|  673|Drosophila melanogaster CG5410-PE,
           isoform E protein.
          Length = 673

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 278 VATSIDKNKKRFDHLSYLYYYCNYFKIITPRLF 180
           V T  D +++R D+L     +C+ +K++ P LF
Sbjct: 556 VGTKCDMDERRQDYLMQPSEFCDKYKLLPPHLF 588


>AE014297-3438|AAN13971.1|  652|Drosophila melanogaster CG5410-PD,
           isoform D protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 278 VATSIDKNKKRFDHLSYLYYYCNYFKIITPRLF 180
           V T  D +++R D+L     +C+ +K++ P LF
Sbjct: 556 VGTKCDMDERRQDYLMQPSEFCDKYKLLPPHLF 588


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,324,488
Number of Sequences: 53049
Number of extensions: 399081
Number of successful extensions: 521
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)