Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0110
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41996-7|AAA83476.1|  298|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AF068709-12|AAO26013.1|  304|Caenorhabditis elegans Serpentine r...    27   9.5  

>U41996-7|AAA83476.1|  298|Caenorhabditis elegans Hypothetical
           protein F38E1.10 protein.
          Length = 298

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 127 D*YLLNFSKLIKITIKYNLHC 65
           D Y++N + ++ +  KYNLHC
Sbjct: 238 DQYIINGNDILDVAAKYNLHC 258


>AF068709-12|AAO26013.1|  304|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 57 protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 491 VDYVMKNNKLIKFEYPAIKKQTLMNTVAILVSYFI 387
           V+  + N  L KF YP +  Q +  T  + V YFI
Sbjct: 169 VEVKIINGTLTKFRYPDVMDQAINVTAVLNVVYFI 203


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,937,535
Number of Sequences: 27780
Number of extensions: 239845
Number of successful extensions: 409
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)