Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0105
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.8  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 236 YGNIKISAMAIVDETKQSWADDDDFQILKPNIN 334
           YG  ++ +    D   Q    DD   ++ P+IN
Sbjct: 335 YGTTRLMSSFAFDNNDQGPPQDDAGNLISPSIN 367


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 236 YGNIKISAMAIVDETKQSWADDDDFQILKPNIN 334
           YG  ++ +    D   Q    DD   ++ P+IN
Sbjct: 336 YGTTRLMSSFAFDNNDQGPPQDDAGNLISPSIN 368


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 397 PSEQYAEWVRVPRDVIGNSGSCPA 468
           P   Y  + R+P    GN+ +CP+
Sbjct: 327 PIWPYTLYFRMPHKCNGNAHNCPS 350


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 397 PSEQYAEWVRVPRDVIGNSGSCPA 468
           P   Y  + R+P    GN+ +CP+
Sbjct: 334 PIWPYTLYFRMPHKCNGNAHNCPS 357


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 397 PSEQYAEWVRVPRDVIGNSGSCP 465
           P   Y  + R+P    GN  SCP
Sbjct: 335 PLWPYTMYFRMPHRCHGNLQSCP 357


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,226
Number of Sequences: 336
Number of extensions: 2747
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)