Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0105
         (705 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34)           50   1e-06
SB_24908| Best HMM Match : Transglut_C (HMM E-Value=0.028)             39   0.003
SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23)                 31   0.69 
SB_56341| Best HMM Match : PAP_assoc (HMM E-Value=5.9e-09)             29   3.7  
SB_51052| Best HMM Match : Ank (HMM E-Value=0)                         29   3.7  
SB_15097| Best HMM Match : p450 (HMM E-Value=0)                        29   3.7  
SB_37484| Best HMM Match : DUF746 (HMM E-Value=4.1)                    29   4.9  
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)          28   8.5  

>SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34)
          Length = 686

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
 Frame = +2

Query: 14  VSIGKDFKVTIDIKNVSDQGRNIKASLSASSFYYNGVKFDIIKKIEGKLYVGPQKNEEVS 193
           V IG DF V + + N S + R +K +++A S +Y G     +  ++ ++ +   K+E + 
Sbjct: 577 VIIGSDFDVVLKMTNTSKEKRTVKIAMTAKSTFYTGRSNYNVTNLKDEVELEANKDETII 636

Query: 194 LVVKVEDYL-PKLVEYGNIKISAMAIVDETKQSWADDDDFQILKP 325
           L +K  DY+ PK      + I   A V +T Q +A  +   + KP
Sbjct: 637 LAIKQADYVRPKQKCDEPMNIFVRAHVQQTDQRYASMETATLKKP 681


>SB_24908| Best HMM Match : Transglut_C (HMM E-Value=0.028)
          Length = 202

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
 Frame = +2

Query: 14  VSIGKDFKVTIDIKNVSDQGRNIKASLSASSFYYNGVK-FDIIKKIEGKLYVGP----QK 178
           V IG DF V +   N   + R++  S++  S  Y G    D+ K +  ++ + P      
Sbjct: 40  VVIGSDFNVIVKANNKGSEKRSVDISITVKSAMYTGRNTHDVAKLLRQRVELEPYHPYMP 99

Query: 179 NEEVSLVVKVEDYL 220
           ++E+ L+VK +DY+
Sbjct: 100 DKEIQLIVKAQDYV 113


>SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23)
          Length = 1178

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +2

Query: 23  GKDFKVTIDIKNVSDQGRNIKASLSASSFYYNGVKFDIIKKIEGKLYVGPQKNEEVSLVV 202
           G  + ++  I      G     S S + F Y G +++I K I   +Y GPQ N   S+ +
Sbjct: 579 GSQYNISQSITIFVYGGSQYNISKSITIFVYGGSQYNISKSITISVYGGPQYNISQSITI 638

Query: 203 KV 208
            V
Sbjct: 639 FV 640


>SB_56341| Best HMM Match : PAP_assoc (HMM E-Value=5.9e-09)
          Length = 503

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -1

Query: 453 AIPDDVTRNSHPLSVLFRGFKSDSSTVAGCPMIRSSLNLMLMFGLRIWKSSSSAQ 289
           AI D+ T     +  ++RGFKS S       +  S +  + +FGLR W + SS +
Sbjct: 436 AINDEETVLQSKMGFMYRGFKSVSLLQFYSALFCSFIFHVGLFGLRGWLNKSSGR 490


>SB_51052| Best HMM Match : Ank (HMM E-Value=0)
          Length = 804

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 456 VVPCAFPPRTSLLKDYSPLNYLFNLTNWVISVSWP 560
           ++PC  P R  LL D + L    +  + V SV+WP
Sbjct: 6   LMPCKLPIRAVLLNDVNMLKQAIDNVDEVHSVNWP 40


>SB_15097| Best HMM Match : p450 (HMM E-Value=0)
          Length = 1310

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 557 ATFKSNELKDINGAATTEVLEG*TDNEFIHRLL--NHLRILTAD 682
           ATF S+ ++D   A     LE   +NE +H ++  +HL +  AD
Sbjct: 700 ATFNSSNIRDFTDALLKARLEAVQENEAVHHMITEDHLIMTIAD 743


>SB_37484| Best HMM Match : DUF746 (HMM E-Value=4.1)
          Length = 465

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -1

Query: 351 SSLNLMLMFGLRIWKSSSSAQDCFVSSTMAIAD 253
           + L+   M+G R+W++SSSA  C +++   + D
Sbjct: 39  AGLSAAQMWGKRVWRASSSAITCPIAARSTLED 71


>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
          Length = 466

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -1

Query: 366 CPMIRSSLNLMLMFGLRIWKSSSSAQDCFVSSTMAIADILM 244
           CP++++   L+L++G+    +S     C VS     A +L+
Sbjct: 72  CPIVKTIYTLLLLYGIHYTLNSQVFAVCVVSVARCFASMLL 112


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,776,292
Number of Sequences: 59808
Number of extensions: 370568
Number of successful extensions: 1039
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)