Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0105
         (705 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010024-1|AAQ22493.1|  776|Drosophila melanogaster RE08173p pro...    69   5e-12
AE014134-1380|AAN10650.1|  768|Drosophila melanogaster CG7356-PB...    69   5e-12
AE014134-1379|AAF52590.2|  776|Drosophila melanogaster CG7356-PA...    69   5e-12
AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-P...    29   6.2  

>BT010024-1|AAQ22493.1|  776|Drosophila melanogaster RE08173p protein.
          Length = 776

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
 Frame = +2

Query: 8    DLVSIGKDFKVTIDIKNVSDQGRNIKAS-LSASSFYYNGVKFDIIKKIEGKLYVGPQKNE 184
            D + IG+ F V + + N S+   ++    +S  +  Y GV    +K +  +L + P+ ++
Sbjct: 546  DDIKIGQSFSVVLKVSNKSESRTHMATGQISCDAVLYTGVGAVEVKTLGFELELEPKSSD 605

Query: 185  EVSLVVKVEDYLPKLVEYGNIKISAMAIVDETKQSWADDDDFQILKPNINIKFKDDLIIG 364
             V + V  E+Y  KL      +ISA A V +T   +   DDF++ KP+I  +  +  I+ 
Sbjct: 606  YVRMEVIFEEYYDKLSSQAAFQISAAAKVKDTDYDYYAQDDFRVRKPDIKFQLGEAAIVA 665

Query: 365  Q-PATVEXXXXXXXXXXXXGCEFRVTSSGIAGRALRVPAADVAPEGLLTVELPIQPNKLG 541
            Q    V                F V   GI  + L+   A++   G         P   G
Sbjct: 666  QKELDVILRLENPLPIPLHKGVFTVEGPGIE-QPLKFKIAEIPVGGTAAATFKYTPPYAG 724

Query: 542  NISFVATFKSNELKDINGAATTEV 613
              + +A F S EL D++G    E+
Sbjct: 725  RGTMLAKFTSKELDDVDGYRHYEI 748


>AE014134-1380|AAN10650.1|  768|Drosophila melanogaster CG7356-PB,
            isoform B protein.
          Length = 768

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
 Frame = +2

Query: 8    DLVSIGKDFKVTIDIKNVSDQGRNIKAS-LSASSFYYNGVKFDIIKKIEGKLYVGPQKNE 184
            D + IG+ F V + + N S+   ++    +S  +  Y GV    +K +  +L + P+ ++
Sbjct: 538  DDIKIGQSFSVVLKVSNKSESRTHMATGQISCDAVLYTGVGAVEVKTLGFELELEPKSSD 597

Query: 185  EVSLVVKVEDYLPKLVEYGNIKISAMAIVDETKQSWADDDDFQILKPNINIKFKDDLIIG 364
             V + V  E+Y  KL      +ISA A V +T   +   DDF++ KP+I  +  +  I+ 
Sbjct: 598  YVRMEVIFEEYYDKLSSQAAFQISAAAKVKDTDYDYYAQDDFRVRKPDIKFQLGEAAIVA 657

Query: 365  Q-PATVEXXXXXXXXXXXXGCEFRVTSSGIAGRALRVPAADVAPEGLLTVELPIQPNKLG 541
            Q    V                F V   GI  + L+   A++   G         P   G
Sbjct: 658  QKELDVILRLENPLPIPLHKGVFTVEGPGIE-QPLKFKIAEIPVGGTAAATFKYTPPYAG 716

Query: 542  NISFVATFKSNELKDINGAATTEV 613
              + +A F S EL D++G    E+
Sbjct: 717  RGTMLAKFTSKELDDVDGYRHYEI 740


>AE014134-1379|AAF52590.2|  776|Drosophila melanogaster CG7356-PA,
            isoform A protein.
          Length = 776

 Score = 69.3 bits (162), Expect = 5e-12
 Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
 Frame = +2

Query: 8    DLVSIGKDFKVTIDIKNVSDQGRNIKAS-LSASSFYYNGVKFDIIKKIEGKLYVGPQKNE 184
            D + IG+ F V + + N S+   ++    +S  +  Y GV    +K +  +L + P+ ++
Sbjct: 546  DDIKIGQSFSVVLKVSNKSESRTHMATGQISCDAVLYTGVGAVEVKTLGFELELEPKSSD 605

Query: 185  EVSLVVKVEDYLPKLVEYGNIKISAMAIVDETKQSWADDDDFQILKPNINIKFKDDLIIG 364
             V + V  E+Y  KL      +ISA A V +T   +   DDF++ KP+I  +  +  I+ 
Sbjct: 606  YVRMEVIFEEYYDKLSSQAAFQISAAAKVKDTDYDYYAQDDFRVRKPDIKFQLGEAAIVA 665

Query: 365  Q-PATVEXXXXXXXXXXXXGCEFRVTSSGIAGRALRVPAADVAPEGLLTVELPIQPNKLG 541
            Q    V                F V   GI  + L+   A++   G         P   G
Sbjct: 666  QKELDVILRLENPLPIPLHKGVFTVEGPGIE-QPLKFKIAEIPVGGTAAATFKYTPPYAG 724

Query: 542  NISFVATFKSNELKDINGAATTEV 613
              + +A F S EL D++G    E+
Sbjct: 725  RGTMLAKFTSKELDDVDGYRHYEI 748


>AE013599-2235|AAF58027.2| 1630|Drosophila melanogaster CG33017-PB
           protein.
          Length = 1630

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 163 RWTTEKRRSQPRGESRGLFAEAGGVREHQDICDGHCR*NEAVLG 294
           RW   +  SQ RGE +  F +  G    +  CD   R N AV G
Sbjct: 298 RWPGPRLCSQKRGEWKPRFRKVIGEDNQKSCCDSWKRNNNAVCG 341


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,946,559
Number of Sequences: 53049
Number of extensions: 567405
Number of successful extensions: 1662
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)