Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0105
         (705 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024756-4|AAX88819.1|  639|Caenorhabditis elegans Hypothetical ...    34   0.11 
Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z48245-2|CAA88291.1|  309|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z37139-10|CAA85495.1|  309|Caenorhabditis elegans Hypothetical p...    29   4.3  
U95074-2|AAB94648.1|  309|Caenorhabditis elegans cyclophilin iso...    29   4.3  
U36581-1|AAC47131.1|  309|Caenorhabditis elegans cyclophilin iso...    29   4.3  
Z32683-8|CAA83622.1|  160|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U58753-1|AAC24437.2|  814|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z78065-5|CAB01515.1|  954|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AC024090-2|AAK67219.1|  658|Caenorhabditis elegans Hypothetical ...    28   7.5  
U41556-8|AAM51518.1|  740|Caenorhabditis elegans Potassium chann...    27   9.9  
AC006617-10|AAF39773.1|  195|Caenorhabditis elegans Hypothetical...    27   9.9  

>AC024756-4|AAX88819.1|  639|Caenorhabditis elegans Hypothetical
           protein Y34D9A.3 protein.
          Length = 639

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
 Frame = +2

Query: 47  DIKNVSDQGRNIKASLSASSFYYNGV-KFD--IIKKIEGKLYVGPQKNEEVSLVVKVEDY 217
           D + + +  +N++A +++  F+ N + KFD   I  IE +L +   + +   L ++++  
Sbjct: 324 DFQFLLETAKNLQAPVNSDGFWRNSLEKFDENSIIFIENQLKIMATRIDRKGLALRIQQI 383

Query: 218 LPKLVEYGNIKISAMAIVDETKQSWADDDDFQILKPNINIKFKDDLIIG 364
             K+++         AI  +  Q   +  DF IL PN +      LI+G
Sbjct: 384 SQKMMQKSGKIEEKTAIFIKFPQILLEIADFSILPPNSSNLLFSTLILG 432


>Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical protein
            R05H10.6 protein.
          Length = 1364

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/75 (25%), Positives = 40/75 (53%)
 Frame = +2

Query: 56   NVSDQGRNIKASLSASSFYYNGVKFDIIKKIEGKLYVGPQKNEEVSLVVKVEDYLPKLVE 235
            ++SDQ + ++ +++ASSF Y G+     + +E  L +   +N ++ L   + DY+  +  
Sbjct: 1065 DLSDQEKKLEYTVTASSFEYRGMS----RNVEDVLDIRGGENPKIYLSKPLTDYVGGVF- 1119

Query: 236  YGNIKISAMAIVDET 280
              N+++     VD T
Sbjct: 1120 --NVQLQVRDTVDGT 1132


>Z48245-2|CAA88291.1|  309|Caenorhabditis elegans Hypothetical
           protein T27D1.1 protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 94  ERIEFLLQRS*I*HHQKNRRKTLRWTTEKRRSQPRGESRGLFAEA-GGVR 240
           +R E+  +RS    H+KNR        +  RSQPR +  G+     GGVR
Sbjct: 227 KRREYRSRRSRSRSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVR 276


>Z37139-10|CAA85495.1|  309|Caenorhabditis elegans Hypothetical
           protein T27D1.1 protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 94  ERIEFLLQRS*I*HHQKNRRKTLRWTTEKRRSQPRGESRGLFAEA-GGVR 240
           +R E+  +RS    H+KNR        +  RSQPR +  G+     GGVR
Sbjct: 227 KRREYRSRRSRSRSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVR 276


>U95074-2|AAB94648.1|  309|Caenorhabditis elegans cyclophilin
           isoform 9 protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 94  ERIEFLLQRS*I*HHQKNRRKTLRWTTEKRRSQPRGESRGLFAEA-GGVR 240
           +R E+  +RS    H+KNR        +  RSQPR +  G+     GGVR
Sbjct: 227 KRREYRSRRSRSRSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVR 276


>U36581-1|AAC47131.1|  309|Caenorhabditis elegans cyclophilin
           isoform 9 protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 94  ERIEFLLQRS*I*HHQKNRRKTLRWTTEKRRSQPRGESRGLFAEA-GGVR 240
           +R E+  +RS    H+KNR        +  RSQPR +  G+     GGVR
Sbjct: 227 KRREYRSRRSRSRSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVR 276


>Z32683-8|CAA83622.1|  160|Caenorhabditis elegans Hypothetical
           protein R07E5.13 protein.
          Length = 160

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
 Frame = -3

Query: 280 RFIDNGHRRYLDVPVLHQL--RQIVLYFHHEAD-FFVFLW 170
           RF+++ +  Y++ PV H+L  ++ VL   H+A+   +FLW
Sbjct: 99  RFVNHNYLHYVEDPVHHKLMMKKEVLEHEHDAERVSLFLW 138


>U58753-1|AAC24437.2|  814|Caenorhabditis elegans Hypothetical
           protein W03B1.2 protein.
          Length = 814

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 95  SASSFYYNG-VKFDIIKKIEGKLYVGP 172
           S +S YY G +K++ + KIE KLY+ P
Sbjct: 602 SKNSAYYKGYLKYEQLTKIESKLYLPP 628


>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical protein
            C25H3.8 protein.
          Length = 2148

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 604  HGSARRVN*QRIHTSTSQSLTHSYSG 681
            H   RR N  R H+S+S  LTH YSG
Sbjct: 1909 HELKRRHNMIRSHSSSSTPLTHLYSG 1934


>Z78065-5|CAB01515.1|  954|Caenorhabditis elegans Hypothetical
           protein T09E8.2 protein.
          Length = 954

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 142 KNRRKTLRWTTEKRRSQPRGESRGLFAEAGGVREHQDICDGH 267
           +NR K LRW  +        ++R L A  GGV   Q +CD H
Sbjct: 228 RNRAKRLRWIEQLASGNETYKNRLLHALRGGVT--QFLCDYH 267


>AC024090-2|AAK67219.1|  658|Caenorhabditis elegans Hypothetical
           protein C52E2.4 protein.
          Length = 658

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -3

Query: 673 KNA*VIEKSMYEFVVSLPFEHFR 605
           KNA +IE  ++ F+VS+PF++FR
Sbjct: 175 KNAKIIE--LFGFIVSIPFDNFR 195


>U41556-8|AAM51518.1|  740|Caenorhabditis elegans Potassium channel,
           kvqlt familyprotein 1, isoform b protein.
          Length = 740

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +2

Query: 455 GRALRVPAADVAPEGLLTVELPIQPNKLGNISFVATFKSNELKDINGAATTE 610
           G  L  P + + P+G++   +P  P  +GN +   T KS     +NG  T +
Sbjct: 11  GGDLLSPESPMTPDGMILARMPWHPGLIGNWN---TVKSVSCSMLNGDETDQ 59


>AC006617-10|AAF39773.1|  195|Caenorhabditis elegans Hypothetical
           protein C39B5.10 protein.
          Length = 195

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
 Frame = -3

Query: 265 GHRRYLDVPVLHQLR-----QIVLYFHHEADFFVFLWSNVEFSFDF 143
           G   +L VP+ HQ R       V +FH + +F+ F W   + +  F
Sbjct: 70  GANNFLSVPIHHQFRIKSSIANVHWFHFKFEFYRFNWHETDKTIHF 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,643,290
Number of Sequences: 27780
Number of extensions: 282102
Number of successful extensions: 826
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)