Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0104
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase pro... 270 3e-72
D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase pro... 270 3e-72
BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase p... 270 3e-72
AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase p... 270 3e-72
BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase p... 267 3e-71
AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase v... 263 3e-70
BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein. 262 1e-69
AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase p... 250 5e-66
BC042912-1|AAH42912.1| 518|Homo sapiens seryl-tRNA synthetase 2... 109 7e-24
AK000457-1|BAA91176.1| 518|Homo sapiens protein ( Homo sapiens ... 109 7e-24
AB029948-1|BAA99557.1| 518|Homo sapiens mitochondrial seryl-tRN... 109 7e-24
BC001020-1|AAH01020.2| 142|Homo sapiens SARS2 protein protein. 88 3e-17
AK093718-1|BAC04219.1| 190|Homo sapiens protein ( Homo sapiens ... 69 1e-11
AF264627-1|AAG03019.1| 84|Homo sapiens uncharacterized gastric... 57 5e-08
BC050616-1|AAH50616.1| 265|Homo sapiens TSSC4 protein protein. 30 6.5
BC006091-1|AAH06091.1| 329|Homo sapiens tumor suppressing subtr... 30 6.5
AF125568-1|AAD23579.1| 329|Homo sapiens tumor suppressing STF c... 30 6.5
BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein. 30 8.6
BC108650-1|AAI08651.1| 471|Homo sapiens NBN protein protein. 30 8.6
BC016762-1|AAH16762.1| 478|Homo sapiens Unknown (protein for IM... 30 8.6
AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndr... 30 8.6
AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein. 30 8.6
AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein. 30 8.6
AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory p... 30 8.6
AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein. 30 8.6
AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein. 30 8.6
>X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 270 bits (662), Expect = 3e-72
Identities = 124/164 (75%), Positives = 140/164 (85%)
Frame = -3
Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
FRVHQFEK +QFV +SPHDN SW+M +EMI AEEF ++LG+PY +VNIVSG+LNHAASK
Sbjct: 316 FRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASK 375
Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
KLDLEAWFPGSGAFRELVSCSNC +YQARRL +RYGQTKKM E+VHMLNATMCATTR
Sbjct: 376 KLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTR 435
Query: 312 VICAILEVHQTEDGIKVPEILKPWLPKQYQELIPFVKPAPIDVE 181
ICAILE +QTE GI VPE LK ++P QELIPFVKPAPI+ E
Sbjct: 436 TICAILENYQTEKGITVPEKLKEFMPPGLQELIPFVKPAPIEQE 479
>D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase
protein.
Length = 514
Score = 270 bits (662), Expect = 3e-72
Identities = 124/164 (75%), Positives = 140/164 (85%)
Frame = -3
Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
FRVHQFEK +QFV +SPHDN SW+M +EMI AEEF ++LG+PY +VNIVSG+LNHAASK
Sbjct: 316 FRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASK 375
Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
KLDLEAWFPGSGAFRELVSCSNC +YQARRL +RYGQTKKM E+VHMLNATMCATTR
Sbjct: 376 KLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTR 435
Query: 312 VICAILEVHQTEDGIKVPEILKPWLPKQYQELIPFVKPAPIDVE 181
ICAILE +QTE GI VPE LK ++P QELIPFVKPAPI+ E
Sbjct: 436 TICAILENYQTEKGITVPEKLKEFMPPGLQELIPFVKPAPIEQE 479
>BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 270 bits (662), Expect = 3e-72
Identities = 124/164 (75%), Positives = 140/164 (85%)
Frame = -3
Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
FRVHQFEK +QFV +SPHDN SW+M +EMI AEEF ++LG+PY +VNIVSG+LNHAASK
Sbjct: 316 FRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASK 375
Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
KLDLEAWFPGSGAFRELVSCSNC +YQARRL +RYGQTKKM E+VHMLNATMCATTR
Sbjct: 376 KLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTR 435
Query: 312 VICAILEVHQTEDGIKVPEILKPWLPKQYQELIPFVKPAPIDVE 181
ICAILE +QTE GI VPE LK ++P QELIPFVKPAPI+ E
Sbjct: 436 TICAILENYQTEKGITVPEKLKEFMPPGLQELIPFVKPAPIEQE 479
>AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 270 bits (662), Expect = 3e-72
Identities = 124/164 (75%), Positives = 140/164 (85%)
Frame = -3
Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
FRVHQFEK +QFV +SPHDN SW+M +EMI AEEF ++LG+PY +VNIVSG+LNHAASK
Sbjct: 316 FRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASK 375
Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
KLDLEAWFPGSGAFRELVSCSNC +YQARRL +RYGQTKKM E+VHMLNATMCATTR
Sbjct: 376 KLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTR 435
Query: 312 VICAILEVHQTEDGIKVPEILKPWLPKQYQELIPFVKPAPIDVE 181
ICAILE +QTE GI VPE LK ++P QELIPFVKPAPI+ E
Sbjct: 436 TICAILENYQTEKGITVPEKLKEFMPPGLQELIPFVKPAPIEQE 479
>BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 267 bits (654), Expect = 3e-71
Identities = 123/164 (75%), Positives = 139/164 (84%)
Frame = -3
Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
FRVHQFEK +QFV +SPHDN SW+M +EMI AEEF ++LG+PY +VNIVSG+LNHAASK
Sbjct: 316 FRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASK 375
Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
KLDLEAWFPGSGAFRELVSCSNC +YQARRL +RYGQTKKM E+VHMLNATMCATT
Sbjct: 376 KLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTC 435
Query: 312 VICAILEVHQTEDGIKVPEILKPWLPKQYQELIPFVKPAPIDVE 181
ICAILE +QTE GI VPE LK ++P QELIPFVKPAPI+ E
Sbjct: 436 TICAILENYQTEKGITVPEKLKEFMPPGLQELIPFVKPAPIEQE 479
>AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase
variant protein.
Length = 514
Score = 263 bits (645), Expect = 3e-70
Identities = 121/164 (73%), Positives = 138/164 (84%)
Frame = -3
Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
FRVHQFEK +QFV +SPHDN SW+M +EMI AEE ++LG+PY +VNIVSG+ +HAASK
Sbjct: 316 FRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEELYQSLGIPYHIVNIVSGSSSHAASK 375
Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
KLDLEAWFPGSGAFRELVSCSNC +YQARRL +RYGQTKKM E+VHMLNATMCATTR
Sbjct: 376 KLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTR 435
Query: 312 VICAILEVHQTEDGIKVPEILKPWLPKQYQELIPFVKPAPIDVE 181
ICAILE +QTE GI VPE LK ++P QELIPFVKPAPI+ E
Sbjct: 436 TICAILENYQTEKGITVPEKLKEFMPPGLQELIPFVKPAPIEQE 479
>BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein.
Length = 511
Score = 262 bits (641), Expect = 1e-69
Identities = 122/164 (74%), Positives = 138/164 (84%)
Frame = -3
Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
FRVHQFEK +QFV +SPHDN SW+M +EMI AEEF ++LG+PY +VNIVSG+LNHAASK
Sbjct: 316 FRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASK 375
Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
KLDLEAWFPGSGAFRELVSCSNC +YQARRL +RYGQTKKM E+VHMLNATMCATTR
Sbjct: 376 KLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATMCATTR 435
Query: 312 VICAILEVHQTEDGIKVPEILKPWLPKQYQELIPFVKPAPIDVE 181
ICAILE +QTE GI VPE ++P QELIPFVKPAPI+ E
Sbjct: 436 TICAILENYQTEKGITVPE---KFMPPGLQELIPFVKPAPIEQE 476
>AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase
protein.
Length = 536
Score = 250 bits (611), Expect = 5e-66
Identities = 125/186 (67%), Positives = 143/186 (76%), Gaps = 22/186 (11%)
Frame = -3
Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
FRVHQFEK +QFV +SPHDN SW+M +EMI AEEF ++LG+PY +VNIVSG+LNHAASK
Sbjct: 316 FRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASK 375
Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKM--------NAAT------- 358
KLDLEAWFPGSGAFRELVSCSNC +YQARRL +RYGQTKKM + +T
Sbjct: 376 KLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLHLSTQNKLEAS 435
Query: 357 -------EYVHMLNATMCATTRVICAILEVHQTEDGIKVPEILKPWLPKQYQELIPFVKP 199
E+VHMLNATMCATTR ICAILE +QTE GI VPE LK ++P QELIPFVKP
Sbjct: 436 LFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPGLQELIPFVKP 495
Query: 198 APIDVE 181
API+ E
Sbjct: 496 APIEQE 501
>BC042912-1|AAH42912.1| 518|Homo sapiens seryl-tRNA synthetase 2,
mitochondrial protein.
Length = 518
Score = 109 bits (263), Expect = 7e-24
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
Frame = -3
Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
+RVH F K + F +T P S Q+++E ++ E LGL +RV+++ + L A +
Sbjct: 343 YRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYR 402
Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
K D+EAW PG G F E+ S SNC ++Q+RRL + + QT+ ++ H +NAT CA R
Sbjct: 403 KFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMF-QTEA--GELQFAHTVNATACAVPR 459
Query: 312 VICAILEVHQTEDG-IKVPEILKPWL 238
++ A+LE +Q +DG + VP L+ +L
Sbjct: 460 LLIALLESNQQKDGSVLVPPALQSYL 485
>AK000457-1|BAA91176.1| 518|Homo sapiens protein ( Homo sapiens
cDNA FLJ20450 fis, clone KAT05607. ).
Length = 518
Score = 109 bits (263), Expect = 7e-24
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
Frame = -3
Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
+RVH F K + F +T P S Q+++E ++ E LGL +RV+++ + L A +
Sbjct: 343 YRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYR 402
Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
K D+EAW PG G F E+ S SNC ++Q+RRL + + QT+ ++ H +NAT CA R
Sbjct: 403 KFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMF-QTEA--GELQFAHTVNATACAVPR 459
Query: 312 VICAILEVHQTEDG-IKVPEILKPWL 238
++ A+LE +Q +DG + VP L+ +L
Sbjct: 460 LLIALLESNQQKDGSVLVPPALQSYL 485
>AB029948-1|BAA99557.1| 518|Homo sapiens mitochondrial seryl-tRNA
synthetase protein.
Length = 518
Score = 109 bits (263), Expect = 7e-24
Identities = 56/146 (38%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
Frame = -3
Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
+RVH F K + F +T P S Q+++E ++ E LGL +RV+++ + L A +
Sbjct: 343 YRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYR 402
Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
K D+EAW PG G F E+ S SNC ++Q+RRL + + QT+ ++ H +NAT CA R
Sbjct: 403 KFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMF-QTEA--GELQFAHTVNATACAVPR 459
Query: 312 VICAILEVHQTEDG-IKVPEILKPWL 238
++ A+LE +Q +DG + VP L+ +L
Sbjct: 460 LLIALLESNQQKDGSVLVPPALQSYL 485
>BC001020-1|AAH01020.2| 142|Homo sapiens SARS2 protein protein.
Length = 142
Score = 87.8 bits (208), Expect = 3e-17
Identities = 45/112 (40%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Frame = -3
Query: 570 EFCKALGLPYRVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVR 391
E LGL +RV+++ + L A +K D+EAW PG G F E+ S SNC ++Q+RRL +
Sbjct: 1 EILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIM 60
Query: 390 YGQTKKMNAATEYVHMLNATMCATTRVICAILEVHQTEDG-IKVPEILKPWL 238
+ QT+ ++ H +NAT CA R++ A+LE +Q +DG + VP L+ +L
Sbjct: 61 F-QTEA--GELQFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYL 109
>AK093718-1|BAC04219.1| 190|Homo sapiens protein ( Homo sapiens
cDNA FLJ36399 fis, clone THYMU2009658, weakly similar to
SERYL-TRNA SYNTHETASE (EC 6.1.1.11). ).
Length = 190
Score = 69.3 bits (162), Expect = 1e-11
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = -3
Query: 645 DQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSG 517
+QFV +SPHDN SW+M +EMI AEEF ++LG+PY +VNIVSG
Sbjct: 110 EQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSG 152
>AF264627-1|AAG03019.1| 84|Homo sapiens uncharacterized gastric
protein YC12P protein.
Length = 84
Score = 57.2 bits (132), Expect = 5e-08
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = -3
Query: 468 PGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAILEV 289
P +RE+ S S C ++QA+R+ +RY K + T Y + +N + A R+I ILE
Sbjct: 2 PSENRYREVSSISICGDFQAQRMKLRY----KEDGKTLYANTINGSGLAIDRIIAIILEQ 57
Query: 288 HQTEDG-IKVPEILKPWLPK 232
+QTE G I++PE+L P+ K
Sbjct: 58 YQTESGYIEIPEVLIPYFGK 77
>BC050616-1|AAH50616.1| 265|Homo sapiens TSSC4 protein protein.
Length = 265
Score = 30.3 bits (65), Expect = 6.5
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 319 GGAHGRVQHVHVFSGSVHLFRLT-VPYKQSSGLVLQTVTTRDKFPERTGSWE-PGLQV 486
G HG +Q V SGSVH + +P ++ G +RD F ++ S E PG +V
Sbjct: 208 GSPHGGLQEVEALSGSVHSGSVPGLPPVETVGFHGSRKRSRDHFRNKSSSPEDPGAEV 265
>BC006091-1|AAH06091.1| 329|Homo sapiens tumor suppressing
subtransferable candidate 4 protein.
Length = 329
Score = 30.3 bits (65), Expect = 6.5
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 319 GGAHGRVQHVHVFSGSVHLFRLT-VPYKQSSGLVLQTVTTRDKFPERTGSWE-PGLQV 486
G HG +Q V SGSVH + +P ++ G +RD F ++ S E PG +V
Sbjct: 272 GSPHGGLQEVEALSGSVHSGSVPGLPPVETVGFHGSRKRSRDHFRNKSSSPEDPGAEV 329
>AF125568-1|AAD23579.1| 329|Homo sapiens tumor suppressing STF cDNA
4 protein.
Length = 329
Score = 30.3 bits (65), Expect = 6.5
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 319 GGAHGRVQHVHVFSGSVHLFRLT-VPYKQSSGLVLQTVTTRDKFPERTGSWE-PGLQV 486
G HG +Q V SGSVH + +P ++ G +RD F ++ S E PG +V
Sbjct: 272 GSPHGGLQEVEALSGSVHSGSVPGLPPVETVGFHGSRKRSRDHFRNKSSSPEDPGAEV 329
>BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 453 FRELVSCSNCLEYQAR----RLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAIL 295
+ LV+CS+CL+ + + +++ G N E H++ ++ T + ICA++
Sbjct: 110 YEPLVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALI 166
>BC108650-1|AAI08651.1| 471|Homo sapiens NBN protein protein.
Length = 471
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 453 FRELVSCSNCLEYQAR----RLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAIL 295
+ LV+CS+CL+ + + +++ G N E H++ ++ T + ICA++
Sbjct: 28 YEPLVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALI 84
>BC016762-1|AAH16762.1| 478|Homo sapiens Unknown (protein for
IMAGE:4104186) protein.
Length = 478
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 453 FRELVSCSNCLEYQAR----RLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAIL 295
+ LV+CS+CL+ + + +++ G N E H++ ++ T + ICA++
Sbjct: 110 YEPLVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALI 166
>AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndrome
1 (nibrin) protein.
Length = 754
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 453 FRELVSCSNCLEYQAR----RLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAIL 295
+ LV+CS+CL+ + + +++ G N E H++ ++ T + ICA++
Sbjct: 110 YEPLVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALI 166
>AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein.
Length = 754
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 453 FRELVSCSNCLEYQAR----RLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAIL 295
+ LV+CS+CL+ + + +++ G N E H++ ++ T + ICA++
Sbjct: 110 YEPLVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALI 166
>AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 453 FRELVSCSNCLEYQAR----RLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAIL 295
+ LV+CS+CL+ + + +++ G N E H++ ++ T + ICA++
Sbjct: 110 YEPLVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALI 166
>AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory
protein p95 protein.
Length = 754
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 453 FRELVSCSNCLEYQAR----RLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAIL 295
+ LV+CS+CL+ + + +++ G N E H++ ++ T + ICA++
Sbjct: 110 YEPLVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALI 166
>AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 453 FRELVSCSNCLEYQAR----RLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAIL 295
+ LV+CS+CL+ + + +++ G N E H++ ++ T + ICA++
Sbjct: 110 YEPLVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALI 166
>AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein.
Length = 754
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -3
Query: 453 FRELVSCSNCLEYQAR----RLLVRYGQTKKMNAATEYVHMLNATMCATTRVICAIL 295
+ LV+CS+CL+ + + +++ G N E H++ ++ T + ICA++
Sbjct: 110 YEPLVACSSCLDVSGKTALNQAILQLGGFTVNNWTEECTHLVMVSVKVTIKTICALI 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,471,689
Number of Sequences: 237096
Number of extensions: 1930398
Number of successful extensions: 4492
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4474
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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