Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0104
         (674 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68882-1|CAA93105.1|  487|Caenorhabditis elegans Hypothetical pr...   258   3e-69
U58753-9|AAC24441.2|  441|Caenorhabditis elegans Seryl trna synt...    97   1e-20
AB016796-1|BAA74732.1|  441|Caenorhabditis elegans Seryl-tRNA sy...    97   1e-20
AC006810-7|AAK84622.2|  333|Caenorhabditis elegans Serpentine re...    32   0.32 
Z81134-3|CAB03446.1|  991|Caenorhabditis elegans Hypothetical pr...    31   0.99 
U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I pro...    31   0.99 
AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase pro...    31   0.99 
AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase pro...    31   0.99 
AL132846-2|CAB60343.1|  174|Caenorhabditis elegans Hypothetical ...    29   2.3  
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z49126-7|CAD56566.1|  392|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z49126-6|CAA88942.2|  530|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z49066-3|CAD56555.1|  392|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z49066-2|CAD56554.1|  530|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p...    27   9.2  
U53335-5|AAY86255.1|  233|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF003385-4|AAB54244.1|  333|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z68882-1|CAA93105.1|  487|Caenorhabditis elegans Hypothetical
           protein C47E12.1 protein.
          Length = 487

 Score =  258 bits (632), Expect = 3e-69
 Identities = 115/162 (70%), Positives = 137/162 (84%)
 Frame = -3

Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
           FRVHQFEK +QFVL SP+DN SW + DEMI NAE + + L +PY+VVNIVSG LN+AA+K
Sbjct: 316 FRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELNNAAAK 375

Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
           K DLEAWFPGSGA+RELVSCSNCL+YQ+RRL VRYGQTKK++    +VHMLNATMCATTR
Sbjct: 376 KFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKKLSGEVPFVHMLNATMCATTR 435

Query: 312 VICAILEVHQTEDGIKVPEILKPWLPKQYQELIPFVKPAPID 187
           VICAILE +QTE+GI VP  ++ W+P+ Y+  IPFVKPAPID
Sbjct: 436 VICAILENNQTEEGINVPTAIQQWMPENYRTFIPFVKPAPID 477


>U58753-9|AAC24441.2|  441|Caenorhabditis elegans Seryl trna
           synthetase protein 1 protein.
          Length = 441

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 50/144 (34%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
 Frame = -3

Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
           +RVH+F K + FV+++P  +A+   +D ++   +   +ALG+  R + + S  L  +A++
Sbjct: 284 YRVHEFSKVEMFVVSTPEQSAA--ELDYLVEVQKGTFQALGVHCRQLEMPSEELGASAAR 341

Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
           K D+EAW PG   + E+ S SNC ++Q+RRL ++Y   K  +  T+Y H  N T  A+TR
Sbjct: 342 KFDIEAWMPGRKLYGEVSSASNCTDFQSRRLGIKY---KTADGTTKYAHTCNGTALASTR 398

Query: 312 VICAILEVHQTE-DGI-KVPEILK 247
            + ++LE  Q +  G+ ++PE L+
Sbjct: 399 ALISVLETFQNDKKGLGELPEPLR 422


>AB016796-1|BAA74732.1|  441|Caenorhabditis elegans Seryl-tRNA
           synthetase protein.
          Length = 441

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 50/144 (34%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
 Frame = -3

Query: 672 FRVHQFEKADQFVLTSPHDNASWQMMDEMINNAEEFCKALGLPYRVVNIVSGALNHAASK 493
           +RVH+F K + FV+++P  +A+   +D ++   +   +ALG+  R + + S  L  +A++
Sbjct: 284 YRVHEFSKVEMFVVSTPEQSAA--ELDYLVEVQKGTFQALGVHCRQLEMPSEELGASAAR 341

Query: 492 KLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAATEYVHMLNATMCATTR 313
           K D+EAW PG   + E+ S SNC ++Q+RRL ++Y   K  +  T+Y H  N T  A+TR
Sbjct: 342 KFDIEAWMPGRKLYGEVSSASNCTDFQSRRLGIKY---KTADGTTKYAHTCNGTALASTR 398

Query: 312 VICAILEVHQTE-DGI-KVPEILK 247
            + ++LE  Q +  G+ ++PE L+
Sbjct: 399 ALISVLETFQNDKKGLGELPEPLR 422


>AC006810-7|AAK84622.2|  333|Caenorhabditis elegans Serpentine
           receptor, class t protein40 protein.
          Length = 333

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +2

Query: 227 YCLGSQGLRISGTLMPSSVWCTSSMAQMTLVVAHMVAFSMCTYSVAAF 370
           YC   + + ISGT++  ++WC+S M+ + LV   ++  S  T++   F
Sbjct: 101 YCTYPRIMYISGTIV-CALWCSSCMSALLLVANRILGMSKPTWAAMIF 147


>Z81134-3|CAB03446.1|  991|Caenorhabditis elegans Hypothetical protein
            T28D6.4 protein.
          Length = 991

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
 Frame = +1

Query: 286  VYLEYGANDPGGGAHGRVQHVHVFSGSVHLFRLTVPYKQSSGLVLQTVTTRDKFPERTGS 465
            VYL +GAN     AHGR   VHV + S +        K+  G+  + V    +    T  
Sbjct: 810  VYLGHGANSSDSDAHGRT-CVHVVA-STNDVAAAKMLKRIGGVNFEAVDRGGRTALMTAV 867

Query: 466  W--EPGLQV*LLGSCMV*SSRHD 528
            W     + V LL SC V  +R D
Sbjct: 868  WAKHVAISVFLLDSCGVDPNRTD 890


>U51925-1|AAA97909.1|  396|Caenorhabditis elegans trehalase I
           protein.
          Length = 396

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -3

Query: 342 LNATMCATTRVICAILEVHQTEDGIKVPEILKPWLPKQYQEL 217
           LNA MCA  R++ ++ E+      +KV E    W  ++ +EL
Sbjct: 159 LNAFMCANARILASLYEIAGDFKKVKVFEQRYTWAKREMREL 200


>AJ512337-1|CAD54510.1|  567|Caenorhabditis elegans trehalase
           protein.
          Length = 567

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -3

Query: 342 LNATMCATTRVICAILEVHQTEDGIKVPEILKPWLPKQYQEL 217
           LNA MCA  R++ ++ E+      +KV E    W  ++ +EL
Sbjct: 330 LNAFMCANARILASLYEIAGDFKKVKVFEQRYTWAKREMREL 371


>AF039713-5|AAB96724.2|  567|Caenorhabditis elegans Trehalase
           protein 1 protein.
          Length = 567

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -3

Query: 342 LNATMCATTRVICAILEVHQTEDGIKVPEILKPWLPKQYQEL 217
           LNA MCA  R++ ++ E+      +KV E    W  ++ +EL
Sbjct: 330 LNAFMCANARILASLYEIAGDFKKVKVFEQRYTWAKREMREL 371


>AL132846-2|CAB60343.1|  174|Caenorhabditis elegans Hypothetical
           protein Y43D4A.2 protein.
          Length = 174

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +3

Query: 480 PSLASWKLHGLELQTRCSRHGTVVLVLCRTLQHCLSFRPSFAKMRYHEEMLEQIGP 647
           P + SW++ GLEL  R  +H      LC+ +  C   R  +   ++ E +L++IGP
Sbjct: 122 PGVRSWRVSGLELY-RIPKHAD----LCQLVPICAQERTLY--YQFFETILKKIGP 170


>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical protein
            T16G12.1 protein.
          Length = 1890

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +1

Query: 223  LILLGKPRFEDFRYLDAVLCLVYLEYGANDPGGGAHGRVQHVHVFSGSVHLFRLTVP 393
            L+++GK  +E    +DAV     L+   N PG G +   +++   + S   F+L  P
Sbjct: 984  LVVIGKTPWEKTPNIDAVFPYYKLDLQVNIPGSGPYQWYENMTFSATSTVTFQLVSP 1040


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +1

Query: 325 AHGRVQHVHVFSGSVHLFRLTVPYKQSSGLVLQTVTTRDKFPERTG 462
           AHG  + +HVF  +  L      +K+   ++     T D+F ++TG
Sbjct: 147 AHGSARSIHVFKNAPRLAAKRKTFKKWRDILDSRGITFDEFTQKTG 192


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +1

Query: 325 AHGRVQHVHVFSGSVHLFRLTVPYKQSSGLVLQTVTTRDKFPERTG 462
           AHG  + +HVF  +  L      +K+   ++     T D+F ++TG
Sbjct: 147 AHGSARSIHVFKNAPRLAAKRKTFKKWRDILDSRGITFDEFTQKTG 192


>Z49126-7|CAD56566.1|  392|Caenorhabditis elegans Hypothetical
           protein DH11.5b protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 331 HVRHHQGHLRHTRGTPDRGRHQGTGN 254
           H+ HH  H   T GT   G+  GTG+
Sbjct: 75  HLHHHHHHNGMTTGTSSMGQIDGTGS 100


>Z49126-6|CAA88942.2|  530|Caenorhabditis elegans Hypothetical
           protein DH11.5a protein.
          Length = 530

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 331 HVRHHQGHLRHTRGTPDRGRHQGTGN 254
           H+ HH  H   T GT   G+  GTG+
Sbjct: 75  HLHHHHHHNGMTTGTSSMGQIDGTGS 100


>Z49066-3|CAD56555.1|  392|Caenorhabditis elegans Hypothetical
           protein DH11.5b protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 331 HVRHHQGHLRHTRGTPDRGRHQGTGN 254
           H+ HH  H   T GT   G+  GTG+
Sbjct: 75  HLHHHHHHNGMTTGTSSMGQIDGTGS 100


>Z49066-2|CAD56554.1|  530|Caenorhabditis elegans Hypothetical
           protein DH11.5a protein.
          Length = 530

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 331 HVRHHQGHLRHTRGTPDRGRHQGTGN 254
           H+ HH  H   T GT   G+  GTG+
Sbjct: 75  HLHHHHHHNGMTTGTSSMGQIDGTGS 100


>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
            protein C32E8.11 protein.
          Length = 1927

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -3

Query: 600  MMDEMINNAEEFCKALGLPYRVVNIVSGAL 511
            + D  IN++E   + LGLP+++   +SG++
Sbjct: 1709 LKDPSINSSEPLFRYLGLPHKIEEQISGSM 1738


>U53335-5|AAY86255.1|  233|Caenorhabditis elegans Hypothetical
           protein C55C3.8 protein.
          Length = 233

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 582 LSFRPSFAKMRYHEEMLEQIGPPFQIDVLE 671
           L FRP+      ++E +E +GP F I ++E
Sbjct: 104 LQFRPALRLSLEYDESIESVGPYFLIIIME 133


>AF003385-4|AAB54244.1|  333|Caenorhabditis elegans Hypothetical
           protein R08F11.2 protein.
          Length = 333

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +2

Query: 227 YCLGSQGLRISGTLMPSSVWCTSSMAQMTLVVAHMVAFSMCTYSVAAFIF 376
           YC     + I+G+    S+WC S +  M+LV+  ++  +  T  +AAF+F
Sbjct: 101 YCTYPNLIYIAGSA-GLSLWCCSCIIAMSLVINRLLELAKPT--LAAFLF 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,215,005
Number of Sequences: 27780
Number of extensions: 290653
Number of successful extensions: 894
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)