Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0103
         (748 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g61600.2 68416.m06901 BTB/POZ domain-containing protein conta...    29   4.3  
At3g61600.1 68416.m06900 BTB/POZ domain-containing protein conta...    29   4.3  
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic...    28   5.7  
At1g55730.1 68414.m06381 cation exchanger, putative (CAX5) simil...    28   7.6  

>At3g61600.2 68416.m06901 BTB/POZ domain-containing protein contains
           Pfam PF00651: BTB/POZ domain; contains Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB
           containing-protein AtPOB1 (GI:12006855) [Arabidopsis
           thaliana]; similar to actinfilin (GI:21667852) [Rattus
           norvegicus]
          Length = 561

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 432 IILSATYFKIEAPHRNQSI 376
           ++L A +FK EAPHR +S+
Sbjct: 374 LVLEALFFKAEAPHRQRSL 392


>At3g61600.1 68416.m06900 BTB/POZ domain-containing protein contains
           Pfam PF00651: BTB/POZ domain; contains Interpro
           IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB
           containing-protein AtPOB1 (GI:12006855) [Arabidopsis
           thaliana]; similar to actinfilin (GI:21667852) [Rattus
           norvegicus]
          Length = 561

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 432 IILSATYFKIEAPHRNQSI 376
           ++L A +FK EAPHR +S+
Sbjct: 374 LVLEALFFKAEAPHRQRSL 392


>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
           to low affinity calcium antiporter CAX2 (GI:1488267)
           [Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
           Family member PMID:11500563
          Length = 441

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -2

Query: 486 FIKLSKSNYFK-LHY*SFYIILSATYFKIEAPHRN 385
           F++   SNYFK L     Y+I++A++F  E PH++
Sbjct: 405 FLQEGSSNYFKGLMLILCYLIVAASFFVHEDPHQD 439


>At1g55730.1 68414.m06381 cation exchanger, putative (CAX5) similar
           to  low affinity calcium antiporter CAX2 [Arabidopsis
           thaliana] gi|1488267|gb|AAB05914; similar to H+/Ca2+
           exchanger 2 [Ipomoea nil] gi|4512263|dbj|BAA75232;
           Ca2+:Cation Antiporter (CaCA) Family member
           PMID:11500563
          Length = 441

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -2

Query: 486 FIKLSKSNYFK-LHY*SFYIILSATYFKIEAPHRN 385
           F++   SNYFK L     Y+I++A++F  E PH++
Sbjct: 405 FLQEGTSNYFKGLMLILCYLIVAASFFVHEDPHQD 439


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,327,461
Number of Sequences: 28952
Number of extensions: 166467
Number of successful extensions: 300
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)