Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0102
(679 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 128 5e-30
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 89 3e-18
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 64 1e-10
SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06) 50 2e-06
SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05) 49 4e-06
SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012) 47 2e-05
SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015) 38 0.007
SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) 38 0.010
SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011) 36 0.023
SB_31704| Best HMM Match : MFS_1 (HMM E-Value=0.024) 36 0.040
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 33 0.28
SB_19693| Best HMM Match : Sugar_tr (HMM E-Value=0.0002) 32 0.37
SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028) 31 0.65
SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11) 31 1.1
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 30 2.0
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 29 2.6
SB_19938| Best HMM Match : TolA (HMM E-Value=0.22) 29 4.6
SB_716| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_59561| Best HMM Match : Pox_A32 (HMM E-Value=0.077) 29 4.6
SB_14022| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_12726| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_56818| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 28 8.0
SB_48772| Best HMM Match : rve (HMM E-Value=4.2e-35) 28 8.0
SB_47407| Best HMM Match : RnaseH (HMM E-Value=5.9) 28 8.0
SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022) 28 8.0
SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_19010| Best HMM Match : Dimerisation (HMM E-Value=9.8) 28 8.0
SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_757| Best HMM Match : RnaseH (HMM E-Value=7.8) 28 8.0
SB_49147| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 28 8.0
SB_42915| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 8.0
SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_28047| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_14976| Best HMM Match : rve (HMM E-Value=1.3e-38) 28 8.0
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38) 28 8.0
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 128 bits (308), Expect = 5e-30
Identities = 61/168 (36%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Frame = +2
Query: 176 GHPIGFSAIALPQLQRENS-SMRTDDEMGSWIASIHSAATPLGSMVSGPVMEAIGRRRTL 352
G +G+S+ AL L E+ S++ GSW +S+ + LG+ + G +E GR+ T+
Sbjct: 59 GFCLGYSSSALEDLIAESKESVKLTVSQGSWFSSLVTLGAILGAPLGGWTLEYFGRKGTI 118
Query: 353 QSCTVPLVVGWIIIGTASHHALLLLGRIVCGFAVGLMAAPSQVYLGEISEPRLRGLLIGT 532
+C VP VGW++I A+ H +L +GR + G AVG+++ VY+ EIS P LRG+L
Sbjct: 119 MACAVPFEVGWMLIAYANSHYMLYIGRFITGLAVGMVSLTVPVYIAEISSPSLRGMLGSV 178
Query: 533 PFVAYSLGVLYVYTLGGPLSWRSVAYLSTVLPILAFIALCFSPESPTW 676
+A ++G+L Y++G L WR +A + P L + + F PE+P W
Sbjct: 179 NQLAVTMGLLLAYSMGVVLKWRWLACSGAIFPALLVVLMFFVPETPRW 226
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 89.0 bits (211), Expect = 3e-18
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Frame = +2
Query: 131 QCLITCAVLILAAGA---GHPIGFSAIALPQLQRENSS--MRTDDEMGSWIASIHSAATP 295
Q + A I A G G+ +G+S+ A QL+ +N++ DE+ +W S+ +
Sbjct: 37 QWAVWMATFIAALGPLSFGYCMGYSSAATTQLENKNATDLYLNADEI-TWFGSLLNIGAM 95
Query: 296 LGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTASHHALLLLGRIVCGFAVGLMAAPS 475
LG + G +++ IGR+ L +VP GW++IG + A+L GR + G VG+ +
Sbjct: 96 LGGPIQGFLIDLIGRKFALILTSVPFCSGWLLIGFGKNAAMLNAGRFMSGLGVGMASLNV 155
Query: 476 QVYLGEISEPRLRGLLIGTPFVAYSLGVLYVYTLGGPLSWRSVAYLSTVLPILAFIALCF 655
VY+ E + RG + + + G+L Y +G WR A + L + + F
Sbjct: 156 PVYISETASFSNRGAMGSINQLGITAGILISYAIGYAFDWRWSAVAGSFPAALLVVLMAF 215
Query: 656 SPESPTWL 679
PE+ WL
Sbjct: 216 MPETARWL 223
>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 493
Score = 64.1 bits (149), Expect = 1e-10
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Frame = +2
Query: 296 LGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTASHHALLLLGRIVCGFAVGLMAAPS 475
+G+++ G + +++GR+ L C+ G +++G A +LL+GR+V G +G +
Sbjct: 102 VGAVLGGILNDSLGRKPVLVLCSGVFTAGAVVMGVAGTKHVLLVGRLVIGLGIGGASMTV 161
Query: 476 QVYLGEISEPRLRGLLI--------GTPFVAYSLGVLYVYTLGGPLSWRSVAYLSTVLPI 631
+Y+ E + +RG L+ G F+A + ++ Y WR + L+ V I
Sbjct: 162 PIYVAEAAPSSMRGKLVTLNNLFITGGQFIASVVDGIFAYDRQN--GWRFMLGLAAVPSI 219
Query: 632 LAFIALCFSPESPTWL 679
+ F PESP WL
Sbjct: 220 IMFFGCVILPESPRWL 235
>SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06)
Length = 624
Score = 50.0 bits (114), Expect = 2e-06
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +2
Query: 296 LGSMVSGPVMEAIGRRRTL-QSCTVPLVVGWIIIGTASHHALLLLGRIVCGFAVGLMAAP 472
+GS++ G + +A GRR + SC + LV+ + A +LL L R GF++
Sbjct: 69 VGSLLGGLISDAFGRRLCMFLSCGI-LVISGVAASFADCLSLLGLLRFCIGFSLASFMLS 127
Query: 473 SQVYLGEISEPRLRGLLIGTPFVAYSLGVLYVYTLGGPL-SWRSVAYLSTVLPILAFIAL 649
S +Y+ E+ P+ R + V YS G +G + WR + +LP F+
Sbjct: 128 SYIYMIELIGPQYRTMGGQISHVFYSPGYCLTALIGYFVRDWRYLNMTCCLLPAFFFLTW 187
Query: 650 CFSPESPTWL 679
PES WL
Sbjct: 188 KVFPESARWL 197
>SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05)
Length = 457
Score = 48.8 bits (111), Expect = 4e-06
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Frame = +2
Query: 83 PYVKGETYSSVR--GVFNQCL-ITCAVLILAAGAGHPIGFSAIALPQLQ--RENSSMRTD 247
P+V + + VR G + + L + +VL++ GA A+ P N + D
Sbjct: 12 PHVYDDIFDHVRSFGSYQRGLWVALSVLVMPMGAQFAALIFAMGTPHYHCATPNWKLICD 71
Query: 248 -DEMGSWIASIHSAATPLGSMVSGPVMEAIGRRRTLQ-SCTVPLV--VGWIIIGTASHHA 415
+G+ + S +GS+V G + +A GR++ L S T+ V VG + S A
Sbjct: 72 RGYLGATLQSCFFVGMLIGSLVCGVISDAWGRKKCLFISYTLLGVAGVGSACVDCVSFFA 131
Query: 416 LLLLGRIVCGFAVGLMAAPSQVYLGEISEPRLRGLLIGTPFVAYSLGVLYVYTLGGPL-- 589
L R V GF + + VYL E+ P+ R LI F + + L L
Sbjct: 132 FL---RFVVGFGLTGVMLSEYVYLAEMVGPKRR-TLIAVLFALFGGAADIFFVLIAYLIR 187
Query: 590 SWRSVAYLSTVLPILAFIALCFSPESPTWL 679
+WR++ + TV + + PESP WL
Sbjct: 188 AWRTLLLVYTVPAFAVLLCWRWIPESPRWL 217
>SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012)
Length = 466
Score = 46.8 bits (106), Expect = 2e-05
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 7/149 (4%)
Frame = +2
Query: 254 MGSWIASIHSAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTASHHALLLLGR 433
+G+ + S++ GS ++G V +A GR+ L T ++ + + R
Sbjct: 109 LGATLQSVYFIGMLFGSFLTGMVSDAWGRKNCLFLFTGIMLAAGVASALVDCVSFFAFLR 168
Query: 434 IVCGFAVGLMAAPSQVYLGEISEPRLRGLLIGTPFVAY----SLGV---LYVYTLGGPLS 592
+ GF + +YL EI P+ R L T +VAY G+ L+ Y + G
Sbjct: 169 FLVGFGLSGAMLSQFIYLTEIVGPKRRTL---TGYVAYLFWGGFGLVILLFAYFIRG--- 222
Query: 593 WRSVAYLSTVLPILAFIALCFSPESPTWL 679
WR++ T+ I+ F + PESP WL
Sbjct: 223 WRTLLLAGTLPAIILFPFWRWIPESPRWL 251
>SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015)
Length = 292
Score = 37.9 bits (84), Expect = 0.007
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
Frame = +2
Query: 272 SIHSAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTASHHALLLLGRIVCGFA 451
+++ A +GS+ + + GRR ++ + I+ G + ++ L R G A
Sbjct: 4 AVYMAGLLVGSVTFSSISDHFGRRLSMFLSIFLMAACGIVSGVSDCLSMFALFRFGAGAA 63
Query: 452 VGLMAAPSQVYLGE--ISEPRLRGLLIGTPFVA--YSLGVLYVYTLGGPLSWRS--VAYL 613
VY E + + R I FV+ +S L+VY + WR VA
Sbjct: 64 CAGCLLARYVYCVELVVRKHRTAAGFISNMFVSVGFSSVTLFVYFIH---EWRYQLVAVS 120
Query: 614 STVLPILAFIALCFSPESPTWL 679
+T LP+L F F PESP WL
Sbjct: 121 ATGLPLLIF--WWFIPESPRWL 140
>SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)
Length = 201
Score = 37.5 bits (83), Expect = 0.010
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Frame = +2
Query: 308 VSGPVM-EAIGRRRTLQSCTVPLVVGWIIIGT---ASHHALLLLGRIVCGFAVGLMAAPS 475
++GP+ GR+R+L + +VG +++ A LL +GR V G G+ A +
Sbjct: 5 LAGPLFANRFGRKRSLLANNGLAIVGALLMFLSYFAKTSPLLTVGRFVIGINCGMNTAIA 64
Query: 476 QVYLGEISEPRLRGLLIGTPFVAYSLGVLYVYTLGGPLSWRSVAYLST 619
+YL E++ LRG L GT G++ +G + V Y ST
Sbjct: 65 PIYLSELAPIHLRGSL-GT---LNQFGIVSGLLVGFIFGLKQVLYYST 108
>SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 968
Score = 36.7 bits (81), Expect = 0.017
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 3/144 (2%)
Frame = +2
Query: 257 GSWIASIHSAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGT--ASHHALLLLG 430
G+ + S A +GS+V G + GRR L + + + + GT A +LL L
Sbjct: 627 GAAVQSCFFAGMLIGSLVGGWASDRFGRRLCLLVGSAIMTI--LSFGTFFADCPSLLALL 684
Query: 431 RIVCGFAVGLMAAPSQVYLGEISEPRLRGLLIGTPFVAYSLGVLYVYTLGGPL-SWRSVA 607
R GFA+ + VY+ E+ P+ R + + LG + +T + WR +
Sbjct: 685 RFGVGFALASVMVCQYVYVIELVGPKARTMSGKVQDFFWDLGDILSFTCAYFIREWRMLI 744
Query: 608 YLSTVLPILAFIALCFSPESPTWL 679
T+ + F P++ WL
Sbjct: 745 LCVTLFFVPFFFFWRVFPDTARWL 768
>SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)
Length = 468
Score = 36.3 bits (80), Expect = 0.023
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 3/144 (2%)
Frame = +2
Query: 257 GSWIASIHSAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGT--ASHHALLLLG 430
G+ + S A +GS+V G + GRR L + + + + GT A +LL L
Sbjct: 114 GAAVQSCFFAGMLIGSLVGGWASDRFGRRLCLLVGSAIMTI--LSFGTFFADCPSLLALL 171
Query: 431 RIVCGFAVGLMAAPSQVYLGEISEPRLRGLLIGTPFVAYSLGVLYVYTLGGPL-SWRSVA 607
R GFA+ + VY+ E+ P+ R + + LG + +T + WR +
Sbjct: 172 RFGVGFALASVMVCQYVYVIELVGPKARTMSGKVQDFFWDLGDVLSFTCAYFIREWRMLI 231
Query: 608 YLSTVLPILAFIALCFSPESPTWL 679
T+ + F P++ WL
Sbjct: 232 LCVTLFFVPFFFFWRVFPDTACWL 255
>SB_31704| Best HMM Match : MFS_1 (HMM E-Value=0.024)
Length = 625
Score = 35.5 bits (78), Expect = 0.040
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
Frame = +2
Query: 266 IASIHSAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTASHHALLLLGRIVCG 445
+ S+ A +GS VSGPV + GR+ T L++G + + L RIV G
Sbjct: 91 VQSMFFAGMLVGSFVSGPVSDIYGRKCCSFVFTATLILGAAVSVVVDCVSFLCFLRIVVG 150
Query: 446 FAVGLMAAPSQVYLGEISEPRLRGLLIGTPFVAY-SLGVL-YVYTLGGPLSWRSVAYLST 619
+ + + E P R +IG + Y + G + +V T WR + L++
Sbjct: 151 VGCSGIFTGTFTLVLEFVGPN-RCTMIGCVYQYYWAFGFMSFVLTAYFIRHWRPMVLLTS 209
Query: 620 VLPILAFIALCFSP 661
+ + F+ +SP
Sbjct: 210 LPALSLFLLKKYSP 223
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 32.7 bits (71), Expect = 0.28
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 7/147 (4%)
Frame = +2
Query: 260 SWIA-SIHSAATPLGSMVSGPVMEAIGRRRTL--QSCTVPLVVGWIIIGTA--SHHALLL 424
SW SI G++V G + + GRR+ L SC +V W+ ++ ++ L
Sbjct: 93 SWATNSIMFTGWLFGNIVFGILSDKYGRRKVLFISSC----MVCWVAFASSFVPYYWLYA 148
Query: 425 LGRIVCGFAVGLMAAPSQVYLGEISEPRLRGLLIGTPFVAYSLGVLYVYTLGGPL--SWR 598
+ R GF +G + E P+ R + GT + G L + L WR
Sbjct: 149 VFRFFIGFGLGGSIVILFIMATEFVGPQKRAMA-GTFTWYFWTGALMLIALLAYFIRDWR 207
Query: 599 SVAYLSTVLPILAFIALCFSPESPTWL 679
++ ++ IL F+ PES WL
Sbjct: 208 ILSITTSAPGILLFLFWWLIPESVRWL 234
>SB_19693| Best HMM Match : Sugar_tr (HMM E-Value=0.0002)
Length = 512
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +2
Query: 413 ALLLLGRIVCGFAVGLMAAPSQVYLGEISEPRLRGLLIGTPFVAYSLGVLYVYTLGGPL- 589
+LL+L R GF++ + VYL E+ P +R + T V + G L +
Sbjct: 155 SLLMLMRFGVGFSLAGLMLTEFVYLVEMVGPGVRTAVGKTHGVFWKFGTWVSVLLSYLIR 214
Query: 590 SWRSVAYLSTVLPILAFIALCFSPESPTWL 679
WR + + ++L F+ PE+ WL
Sbjct: 215 DWRLMVLIGSLLIFYIFVFWRVFPETARWL 244
>SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028)
Length = 630
Score = 31.5 bits (68), Expect = 0.65
Identities = 12/47 (25%), Positives = 29/47 (61%)
Frame = +2
Query: 254 MGSWIASIHSAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIII 394
+G+ + ++ A +GS++SG + +A GR+ + +CT + W+++
Sbjct: 299 IGASLQAVFFAGMMIGSVISGMMADAWGRKPCIFACTTLMSPRWLML 345
>SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11)
Length = 302
Score = 30.7 bits (66), Expect = 1.1
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 6/144 (4%)
Frame = +2
Query: 266 IASIHSAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTASHHALLLLGRIVCG 445
+ S++ GS++SG + +A GR+ +L +I + H L++ G
Sbjct: 57 VQSMYFVGYLFGSLLSGTLSDAFGRKISLTVSVALQAAAFIGASFVTSHTALIILIFFAG 116
Query: 446 FAVGLMAAPSQVYLGEISEPRLRGL--LIGTPF--VAYSLGVLYVYTLGGPLSWRSVAYL 613
++ A + E+ P R + +I F + L +L Y + WR+ +
Sbjct: 117 LSIASSIACQYTLIIEMIGPDHRTIAGIINELFWKAGWLLIILVAYFI---RDWRTFMLI 173
Query: 614 STV--LPILAFIALCFSPESPTWL 679
L IL F F ESP WL
Sbjct: 174 GAAPGLAILLFWKWIF--ESPRWL 195
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 380 GWIIIGTASHHALLLLGRIVCGFAVGLMAAPSQVYLGEISEPRLRGLLIGT 532
GW+++ L LG CG V +M + V SEP + G L T
Sbjct: 50 GWVVVAAGKEEYLKSLG---CGMCVEIMVSGQPVSTAHGSEPPMNGSLKAT 97
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 224 ENSSMRTDDEMGSWIASIHSAATPL-GSMVSGP 319
E + TD +M SWI ++HSA + G SGP
Sbjct: 605 EKDTAYTDADMQSWIKALHSAIKSIRGRTASGP 637
>SB_19938| Best HMM Match : TolA (HMM E-Value=0.22)
Length = 2279
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = +1
Query: 136 PHNMCSVDPCRRCGSSYRFLSDCSTTTAA*E*LYENRRRDGLLDRQYPLGSYPSRLDGVR 315
PH CSVD ++ S++ ++ A +Y + D + P D V
Sbjct: 1436 PHESCSVDGDKQLASTFIYVEQTQIIHMAATQMYLKKDEDS-SSVEEPQLEIRGGDDRVS 1494
Query: 316 SGDGSHRAAADATVLHRP 369
D A DA V+H P
Sbjct: 1495 KNDNDANLATDAGVVHTP 1512
>SB_716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 330 PSGGGGRYSPAPSRWSLG 383
P GGGG YSP P R G
Sbjct: 84 PGGGGGTYSPHPKRLDTG 101
>SB_59561| Best HMM Match : Pox_A32 (HMM E-Value=0.077)
Length = 986
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 235 YENRRRDGLLDRQYPLGSYPSRLDGVRSGDGSHRAAADATVLHRPA 372
+ RRRD + G P R G RSGD + R+ A + PA
Sbjct: 707 FRGRRRDSA-HKATAGGHRPDRHQGARSGDSASRSQVSAAIHGSPA 751
>SB_14022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 232 LYENRRRDGLLDRQYPLGSYPSRLDGVRSGDGSHRAAADATVLHRPAGR 378
+Y R + G R YP G+ ++ G S + A+ LHRP GR
Sbjct: 253 VYNKRVQRG--KRSYPYGAGQTKQGGNTSASRTKFTLANTYTLHRPCGR 299
>SB_12726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +2
Query: 278 HSAATPLGSMVSGPVMEAIG--RRRTLQSCTVPLVVGWII---IGTASHHALLLLGRIV 439
H++ G VSGP++EAI ++S V L+VGW+I + + HA L L ++
Sbjct: 5 HASRREKGGQVSGPLIEAIPYCAAHRVRSFGV-LLVGWVIGDPLESTCRHASLALAVVL 62
>SB_56818| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 796
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 588 HMFLYGTHFEILTDHKPLISVLGPTSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 645
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 646 ALSRLPVG 653
>SB_48772| Best HMM Match : rve (HMM E-Value=4.2e-35)
Length = 494
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 45 HMFLYGTHFEILTDHKPLISVLGPKSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 102
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 103 ALSRLPVG 110
>SB_47407| Best HMM Match : RnaseH (HMM E-Value=5.9)
Length = 271
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 161 HMFLYGTHFEILTDHKPLISVLGPTSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 218
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 219 ALSRLPVG 226
>SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022)
Length = 453
Score = 27.9 bits (59), Expect = 8.0
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +2
Query: 257 GSWIASIHSAATPLGSMVSGPVMEAIGRRRTLQSCTVPLVVGWIIIGTASHHALLLLGRI 436
G+ + S A +GSMV G + GRR L + +++ + GTA L LL +
Sbjct: 115 GAAVQSCFFAGMLVGSMVGGWASDRFGRRLCLLVGSAIMLI--LSFGTAFADCLSLLAFL 172
Query: 437 VCGFAVGLMAAP--SQVYLGEISEPRLR 514
G V ++ VY+ E+ P+ R
Sbjct: 173 RFGVGVAHVSVMVCQYVYVIELVGPKTR 200
>SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1551
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 1043 HMFLYGTHFEILTDHKPLISVLGPKSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 1100
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 1101 ALSRLPVG 1108
>SB_19010| Best HMM Match : Dimerisation (HMM E-Value=9.8)
Length = 223
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 146 HMFLYGTHFEILTDHKPLISVLGPTSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 203
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 204 ALSRLPVG 211
>SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 595 HMFLYGTHFEILTDHKPLISVLGPKSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 652
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 653 ALSRLPVG 660
>SB_757| Best HMM Match : RnaseH (HMM E-Value=7.8)
Length = 193
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 70 HMFLYGTHFEILTDHKPLISVLGPKSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 127
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 128 ALSRLPVG 135
>SB_49147| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 667
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 544 HMFLYGTHFEILTDHKPLISVLGPTSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 601
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 602 ALSRLPVG 609
>SB_42915| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 610
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 70 HMFLYGTHFEILTDHKPLISVLGPTSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 127
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 128 ALSRLPVG 135
>SB_31504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 227 HMFLYGTHFEILTDHKPLISVLGPTSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 284
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 285 ALSRLPVG 292
>SB_28047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 962
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = -2
Query: 324 ITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGRAIAEKPIG*PAPAARINTAH 145
+TG T+ V ++ I ++ P+S++ L +L S CSCG P G P + H
Sbjct: 544 VTGA-TLTSANVISDLIQSL--PVSTAALKKLRSHCSCG------PHGIPVKFIKHAADH 594
Query: 144 V---MRH*LNTPRTEEY 103
+ + H LNT ++EY
Sbjct: 595 LASPLTHILNTCISQEY 611
>SB_14976| Best HMM Match : rve (HMM E-Value=1.3e-38)
Length = 1172
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 723 HMFLYGTHFEILTDHKPLISVLGPKSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 780
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 781 ALSRLPVG 788
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 359 HMFLYGTHFEILTDHKPLISVLGPTSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 416
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 417 ALSRLPVG 424
>SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 899
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITGPDTIEPRGVAAEWILAIQEPISSSVLIELFSRCSCGR 205
H GT + +P+ S+ GP + P W+L +Q+ S V+ + + +
Sbjct: 359 HMFLYGTHFEILTDHKPLISVLGPKSKPPSARIERWLLYLQQ--FSYVVRHISGKENSAD 416
Query: 204 AIAEKPIG 181
A++ P+G
Sbjct: 417 ALSRLPVG 424
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,726,946
Number of Sequences: 59808
Number of extensions: 635992
Number of successful extensions: 1654
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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