Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0102
(679 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 24 1.2
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 24 1.2
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 24 1.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.5
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 23 3.5
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 23 3.5
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 23 3.5
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 4.7
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 4.7
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 22 6.2
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 22 6.2
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 114 TEEYVSPLTYGGNVAVELILRRKLCRASYSSCL 16
T+ V YG N +++ +RRK CL
Sbjct: 216 TKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCL 248
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 114 TEEYVSPLTYGGNVAVELILRRKLCRASYSSCL 16
T+ V YG N +++ +RRK CL
Sbjct: 13 TKNAVYQCKYGNNCEIDMYMRRKCQECRLKKCL 45
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +2
Query: 374 VVGWIIIGTASHHALLLLGRIVCGFAVGLMAAPSQVYLGEISEPRLR 514
+ G + IGTA+ +G ++ G GL++ Y+ + + L+
Sbjct: 278 LAGGVAIGTAAGMMCQPVGTLIVGALAGLLSVLGYKYITPLIQKHLK 324
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 1.5
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -2
Query: 384 HPTTSGTVQDCSVRRRPMASITG----PDTIEPRGVAAEWILAIQEPISSSV 241
H T+ CS R+RP + T P +I +++ +L+ E +SS V
Sbjct: 871 HENNQPTMNKCSDRKRPASQATSVKAEPGSIMAMSESSKKVLSPGELLSSCV 922
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 146 CAVLILAAGAG 178
CAVLI+AAG G
Sbjct: 38 CAVLIVAAGTG 48
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 146 CAVLILAAGAG 178
CAVLI+AAG G
Sbjct: 54 CAVLIVAAGTG 64
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 146 CAVLILAAGAG 178
CAVLI+AAG G
Sbjct: 111 CAVLIVAAGTG 121
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 146 CAVLILAAGAG 178
CAVLI+AAG G
Sbjct: 111 CAVLIVAAGIG 121
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/53 (22%), Positives = 20/53 (37%)
Frame = +2
Query: 521 LIGTPFVAYSLGVLYVYTLGGPLSWRSVAYLSTVLPILAFIALCFSPESPTWL 679
L+G P V ++ + GP +W + + +LA S WL
Sbjct: 539 LLGGPLVMVCSAPVWRFQPWGPFTWGGIGVVVLFAVVLAGATCLGSSIKAMWL 591
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +3
Query: 39 YRVSCAVSAQRPHYHHTSKEKHTLPFGVYSI 131
YR+SC +S + + T + L G +I
Sbjct: 65 YRISCLLSIFKQEFDETERASGDLSLGQKTI 95
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 21.8 bits (44), Expect = 6.2
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +3
Query: 39 YRVSCAVSAQRPHYHHTSKEKHTLPFGVYSI 131
YR+SC +S + + T + L G +I
Sbjct: 33 YRISCLLSIFKQEFDETERASGDLSLGQKTI 63
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,931
Number of Sequences: 438
Number of extensions: 5558
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -