Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0101
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   7.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   7.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   7.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   7.0  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   7.0  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 169 STVTQCCRPLNFRSMLVQQRLCFLP 243
           ST    CR   FR+   +  +CF P
Sbjct: 383 STTANSCRSSTFRNNRDEYNVCFRP 407


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 543 ASPTHQ*PSHVSAV 584
           A PT+Q P H+S V
Sbjct: 12  ALPTYQQPQHISGV 25


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 543 ASPTHQ*PSHVSAV 584
           A PT+Q P H+S V
Sbjct: 12  ALPTYQQPQHISGV 25


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 493 GDRESGQKYGLLS 531
           GDR SG+ YG+ S
Sbjct: 90  GDRASGKHYGVYS 102


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 28  HRIDKFIKNLNA 63
           HR+ K IK LNA
Sbjct: 220 HRLSKLIKQLNA 231


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 543 ASPTHQ*PSHVSAV 584
           A PT+Q P H+S V
Sbjct: 12  ALPTYQQPQHISGV 25


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 543 ASPTHQ*PSHVSAV 584
           A PT+Q P H+S V
Sbjct: 12  ALPTYQQPQHISGV 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,195
Number of Sequences: 336
Number of extensions: 3161
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)