Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0100
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5FHE8 Cluster: DNA mismatch repair protein mutS; n=9; ...    36   1.4  
UniRef50_Q4CRV5 Cluster: Putative uncharacterized protein; n=2; ...    34   4.4  
UniRef50_Q4UCP8 Cluster: Putative uncharacterized protein; n=2; ...    33   5.8  
UniRef50_Q9Y1L5 Cluster: S-adenosylmethionine decarboxylase-orni...    33   7.7  

>UniRef50_Q5FHE8 Cluster: DNA mismatch repair protein mutS; n=9;
           Anaplasmataceae|Rep: DNA mismatch repair protein mutS -
           Ehrlichia ruminantium (strain Gardel)
          Length = 804

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = +3

Query: 273 VRDRAKPLSSVKPLRSVHFKIFFYYVESPHQMPLIDLQTLHR--LANNTHFK*TSLKQ 440
           +RDR + +++++ L+ ++  I  YYVE      + D   +HR  LANN  +  T LK+
Sbjct: 453 LRDRYRNITNIQSLKILYNNILGYYVEVSSNHLIDDKNFIHRQSLANNVRYTTTELKE 510


>UniRef50_Q4CRV5 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 455

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = -1

Query: 762 QYTNSIFVCMCCVKYMAVCVMFCLLI*CIFYALFKKNINIVHFSISVENFILLRPRNFRK 583
           +Y++  F C CC      C++FC+   C    LF   + + HF   +   +LLR  +  K
Sbjct: 46  EYSSECFCCCCC----CCCILFCV---CGASLLFNP-VRLPHFVTYLNASLLLRGASSLK 97

Query: 582 KG--FYKVFASRI 550
           KG  F +V   R+
Sbjct: 98  KGMRFSRVICGRL 110


>UniRef50_Q4UCP8 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 544

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +1

Query: 7   FYLTKISNF--IFIFNVNHSISLCSVDLHEIYIFSC 108
           F   KISN+  + +  V +SI+LCSV L+ +Y F+C
Sbjct: 115 FLFFKISNYRVVILILVEYSIALCSVALYILYKFNC 150


>UniRef50_Q9Y1L5 Cluster: S-adenosylmethionine decarboxylase-ornithine
            decarboxylase; n=6; Plasmodium falciparum|Rep:
            S-adenosylmethionine decarboxylase-ornithine
            decarboxylase - Plasmodium falciparum
          Length = 1419

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 511  FSH*PKCHLNLYINT*SKNFVESLFTKIARTE-EYEIFHTYREVHNINI 654
            + + PKC L L IN   KN+   + +K    E E+E    Y + HN+NI
Sbjct: 944  YKYHPKCSLILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNI 992


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,458,169
Number of Sequences: 1657284
Number of extensions: 14565048
Number of successful extensions: 30661
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30432
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)