Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0100
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    27   0.16 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.66 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.66 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.66 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.66 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.66 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.66 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.66 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.66 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    25   0.87 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.6  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.1  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.1  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 207 SNVFIAIVDKQAHGSPDGEWLMVRDRAKPLSSVKPLRSV 323
           SN   A+V+  AHG+P  + + VR     +  V  LR V
Sbjct: 36  SNTTGAVVECSAHGNPTPDIIWVRSDGTAVGDVPGLRQV 74


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 304 TEDSGLALSLTISHSPSGEPCACLSTMAMKT 212
           T+ SGL   L++S SP G+P    ++  + +
Sbjct: 138 TKSSGLTSPLSVSTSPPGKPATSTTSQNLSS 168


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 304 TEDSGLALSLTISHSPSGEPCACLSTMAMKT 212
           T+ SGL   L++S SP G+P    ++  + +
Sbjct: 138 TKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 304 TEDSGLALSLTISHSPSGEPCACLSTMAMKT 212
           T+ SGL   L++S SP G+P    ++  + +
Sbjct: 138 TKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 304 TEDSGLALSLTISHSPSGEPCACLSTMAMKT 212
           T+ SGL   L++S SP G+P    ++  + +
Sbjct: 138 TKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 304 TEDSGLALSLTISHSPSGEPCACLSTMAMKT 212
           T+ SGL   L++S SP G+P    ++  + +
Sbjct: 138 TKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 304 TEDSGLALSLTISHSPSGEPCACLSTMAMKT 212
           T+ SGL   L++S SP G+P    ++  + +
Sbjct: 94  TKSSGLTSPLSVSTSPPGKPATSTASQNLSS 124


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 304 TEDSGLALSLTISHSPSGEPCACLSTMAMKT 212
           T+ SGL   L++S SP G+P    ++  + +
Sbjct: 138 TKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 304 TEDSGLALSLTISHSPSGEPCACLSTMAMKT 212
           T+ SGL   L++S SP G+P    ++  + +
Sbjct: 138 TKSSGLTSPLSVSTSPPGKPATSTASQNLSS 168


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 304 TEDSGLALSLTISHSPSGEP 245
           T+ SGL   L++S SP G+P
Sbjct: 138 TKSSGLTSPLSVSTSPPGKP 157


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 750 SIFVCMCCVKYMAVCVMFCLLI*CIFYALFKKNINIVH 637
           ++ VC     Y    + F   I C F AL    +NIVH
Sbjct: 59  TLHVCFNSYMYAFTHIFFFFAICCDFIALIV--VNIVH 94


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 170 CFKYIVYLDRVTLNLCNVMQS 108
           C KY+V  +  +L  CN++ S
Sbjct: 53  CVKYLVEDEETSLATCNMLCS 73


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/47 (21%), Positives = 20/47 (42%)
 Frame = +1

Query: 10  YLTKISNFIFIFNVNHSISLCSVDLHEIYIFSCDCITLHKFNVTRSK 150
           Y + +    FI         CS   H++Y F      +++ N T+++
Sbjct: 328 YFSNLDKDAFIHRTVDDYFFCSPHPHKVYDFELLIKGVYQVNPTKTR 374


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 410 YAFQINFFETAKKREYLLR 466
           Y +Q  F + +KKR  LLR
Sbjct: 293 YEYQDRFSDESKKRRELLR 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,208
Number of Sequences: 336
Number of extensions: 4483
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)