Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0100
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110479-6|CAB54354.2|  447|Caenorhabditis elegans Hypothetical ...    31   0.68 
Z70718-9|CAA94678.2|  371|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AL034365-2|CAA22257.1|  366|Caenorhabditis elegans Hypothetical ...    28   8.3  

>AL110479-6|CAB54354.2|  447|Caenorhabditis elegans Hypothetical
           protein Y105C5B.8 protein.
          Length = 447

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
 Frame = -2

Query: 176 VYCFKYIVYLDRVTLNLCNVMQS------HENMYISCKSTEHNEM 60
           +YCFK+++Y  R  +N+ +++QS       EN + S   TEH E+
Sbjct: 400 IYCFKFVLYNTRTIVNI-DLVQSVSSRNQSENAFYSITDTEHVEL 443


>Z70718-9|CAA94678.2|  371|Caenorhabditis elegans Hypothetical
           protein C04G2.9 protein.
          Length = 371

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 9/28 (32%), Positives = 21/28 (75%)
 Frame = +3

Query: 672 KRYIKSINKTLHTLPCI*HNTYIQIYYL 755
           ++ +K+++KTL TLP +  + Y+ ++Y+
Sbjct: 208 RQLVKALDKTLDTLPGVNPDQYVALWYM 235


>AL034365-2|CAA22257.1|  366|Caenorhabditis elegans Hypothetical
           protein Y69E1A.2 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 9/28 (32%), Positives = 21/28 (75%)
 Frame = +3

Query: 672 KRYIKSINKTLHTLPCI*HNTYIQIYYL 755
           ++ +K+++KTL TLP +  + Y+ ++Y+
Sbjct: 203 RQLVKALDKTLDTLPGVNPDQYVALWYM 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,948,394
Number of Sequences: 27780
Number of extensions: 386956
Number of successful extensions: 797
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)