Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0100
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   4.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   4.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.1  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   5.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.4  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +1

Query: 544 YINT*SKNFVESLFTKIARTEEYEIFHTYREVHNINIFF 660
           +IN  S  F E L  K+  T EY   H Y    +   +F
Sbjct: 64  HINCDSSKFEEDLMNKLPTTPEYN-NHLYGSTPDSRDYF 101


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 327 SVHFLMA*RKTVAWLCP*PLATHHQVSRV 241
           SVH+     +T + LCP P +TH +VS +
Sbjct: 369 SVHYSNG--QTHSQLCPTPRSTHLKVSGI 395


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 225 IVDKQAHGSPDGEWLMVRDRA 287
           IV K+A GS  GE+  +R+RA
Sbjct: 741 IVWKKATGSKSGEYEELRERA 761


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 225 IVDKQAHGSPDGEWLMVRDRA 287
           IV K+A GS  GE+  +R+RA
Sbjct: 737 IVWKKATGSKSGEYEELRERA 757


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 486 DIFLTLNLRRYSLFLAVS 433
           DIF  + LRR +LF  V+
Sbjct: 224 DIFFNITLRRKTLFYTVN 241


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 478  PDIKSQKIFPFFGC 437
            PD++  K++ FFGC
Sbjct: 995  PDLEYGKVWLFFGC 1008


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,979
Number of Sequences: 438
Number of extensions: 4685
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)