BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0099
(397 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87411-1|CAA60858.1| 599|Anopheles gambiae maltase-like protein... 23 4.1
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 22 7.1
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 22 7.1
AF513639-1|AAM53611.1| 195|Anopheles gambiae glutathione S-tran... 22 9.4
>X87411-1|CAA60858.1| 599|Anopheles gambiae maltase-like protein
Agm2 protein.
Length = 599
Score = 23.0 bits (47), Expect = 4.1
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 127 TLADYKATLPILKSYPKVTVEVKWE-LQSEHGDLICVLIN 243
T A K LP+ YP V V+ + E Q+ H + L+N
Sbjct: 438 TNASVKPWLPLATDYPLVNVKTQQESAQNSHIKVFKELMN 477
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 22.2 bits (45), Expect = 7.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 261 YLDQLSVYKNAN*VAMFTLELPL 193
+LD Y N VA+FT+E+ L
Sbjct: 512 WLDDFQEYTNMFFVALFTMEMLL 534
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 22.2 bits (45), Expect = 7.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 366 TQKHSNLQNYCLSVPALSL 310
T K + NY S+P +SL
Sbjct: 138 TDKDNTTNNYLFSIPTISL 156
>AF513639-1|AAM53611.1| 195|Anopheles gambiae glutathione
S-transferase S1-2 protein.
Length = 195
Score = 21.8 bits (44), Expect = 9.4
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 245 LNWSK*YFPTLLDYRKILAR 304
L+W+ YF +LDY + +
Sbjct: 141 LSWADIYFTAILDYLNYMTK 160
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,264
Number of Sequences: 2352
Number of extensions: 8099
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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