Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0099
         (397 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g33120.1 68417.m04718 coclaurine N-methyltransferase, putativ...    26   7.9  
At2g46710.1 68415.m05828 rac GTPase activating protein, putative...    26   7.9  
At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate 5-ki...    26   7.9  

>At4g33120.1 68417.m04718 coclaurine N-methyltransferase, putative
           similar to coclaurine N-methyltransferase [Coptis
           japonica] GI:16754879
          Length = 355

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = -2

Query: 204 ELPLYFHCHLRIRLQDRQCCFIIRQGSLLEGAGQPVV---LARVRLRQGERYRDV 49
           ELP  F  H   R     CC+     S LE AG+ ++     R ++  G+   D+
Sbjct: 82  ELPTAFFEHALGRNIKYSCCYYSNDSSSLEEAGEAMLALSCERAKVEDGQSVLDI 136


>At2g46710.1 68415.m05828 rac GTPase activating protein, putative
           similar to rac GTPase activating protein 2 [Lotus
           japonicus] GI:3695061; contains Pfam profiles PF00620:
           RhoGAP domain, PF00786: P21-Rho-binding domain
          Length = 455

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 104 SPLSLHASDSGRGNGIG 54
           +PLS HAS SG G+G G
Sbjct: 54  TPLSSHASRSGNGSGSG 70


>At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate
           5-kinase, putative / PIP kinase, putative /
           PtdIns(4)P-5-kinase, putative / diphosphoinositide
           kinase, putative strong similarity to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 754

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +1

Query: 82  DACKDNGLTCPLKEGTLADYKA-TLPILKSYPKVTVEVKWELQSEHGDLICVLINAQLV* 258
           D  + N L    ++ +  D  A +L   K +P++ +   WE   E GD+ C +++     
Sbjct: 259 DGIEKNELIVATRKRSSVDSGAGSLTGEKIFPRICI---WESDGEAGDITCDIVDNVEAS 315

Query: 259 IVLPDFIRLQED 294
           ++  D I + +D
Sbjct: 316 VIYRDRISIDKD 327


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,755,141
Number of Sequences: 28952
Number of extensions: 170524
Number of successful extensions: 390
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 565902384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)