Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0097
         (734 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0632 - 20112297-20116562                                         29   5.1  
02_05_0409 - 28723534-28724646                                         29   5.1  
02_05_0704 - 31064996-31065214,31065306-31065466,31065583-310656...    28   8.8  

>07_03_0632 - 20112297-20116562
          Length = 1421

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 358 ITSYFII*NFICKVFLRNCLVFVGIFGFIYIY-KNELLFVSLAKTRIRLD 504
           I S F I +     +LR CLVF  IF   Y++ K EL+ + +A   + LD
Sbjct: 462 IISSFGICHSELPAYLRQCLVFCSIFPRNYLFEKYELIQMWIANGFVELD 511


>02_05_0409 - 28723534-28724646
          Length = 370

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -3

Query: 609 TKLLFLFNSGHFHIYLPF-----KPSLDFTNHSRPKLAKSVQPYSSF 484
           ++ L LF+S H    LP       P LD+T HS P+ A  V+    F
Sbjct: 144 SRRLLLFHSKHAFFSLPVGDAGHNPRLDWTKHSLPRAASFVRSILEF 190


>02_05_0704 -
           31064996-31065214,31065306-31065466,31065583-31065660,
           31066560-31066651,31066775-31066833,31066924-31067010,
           31067118-31067214,31067311-31067495,31067593-31067665,
           31067725-31067805,31067948-31068048,31068133-31068246,
           31068391-31068488,31069789-31069915
          Length = 523

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -2

Query: 247 LFFVFIKNYNQNFCFWINLNSFFLNTICLAFTAFINLSI 131
           +FF ++ +    F  + NLNSF    I L F+ F+ LS+
Sbjct: 392 IFFAYVGSAGVGFLQFCNLNSFRTKFI-LGFSVFMGLSV 429


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,428,792
Number of Sequences: 37544
Number of extensions: 244857
Number of successful extensions: 446
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)