Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0097
         (734 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99458-1|CAA67823.1|  193|Homo sapiens sigma 3A protein protein.       32   2.5  
U91932-1|AAD03779.1|  193|Homo sapiens AP-3 complex sigma3A subu...    32   2.5  
D63643-1|BAA09798.1|  193|Homo sapiens clathrin coat assembly pr...    32   2.5  
CR450341-1|CAG29337.1|  193|Homo sapiens AP3S1 protein.                32   2.5  
BT009833-1|AAP88835.1|  193|Homo sapiens adaptor-related protein...    32   2.5  
BC000804-1|AAH00804.1|  193|Homo sapiens adaptor-related protein...    32   2.5  

>X99458-1|CAA67823.1|  193|Homo sapiens sigma 3A protein protein.
          Length = 193

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -3

Query: 555 KPSLDFTNHSRPKLAKSVQPYSSFSETNEQQFI 457
           K  L F NH +P+L+K  QPY   SE  +QQ I
Sbjct: 3   KAILIFNNHGKPRLSKFYQPY---SEDTQQQII 32


>U91932-1|AAD03779.1|  193|Homo sapiens AP-3 complex sigma3A subunit
           protein.
          Length = 193

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -3

Query: 555 KPSLDFTNHSRPKLAKSVQPYSSFSETNEQQFI 457
           K  L F NH +P+L+K  QPY   SE  +QQ I
Sbjct: 3   KAILIFNNHGKPRLSKFYQPY---SEDTQQQII 32


>D63643-1|BAA09798.1|  193|Homo sapiens clathrin coat assembly
           protein-like protein.
          Length = 193

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -3

Query: 555 KPSLDFTNHSRPKLAKSVQPYSSFSETNEQQFI 457
           K  L F NH +P+L+K  QPY   SE  +QQ I
Sbjct: 3   KAILIFNNHGKPRLSKFYQPY---SEDTQQQII 32


>CR450341-1|CAG29337.1|  193|Homo sapiens AP3S1 protein.
          Length = 193

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -3

Query: 555 KPSLDFTNHSRPKLAKSVQPYSSFSETNEQQFI 457
           K  L F NH +P+L+K  QPY   SE  +QQ I
Sbjct: 3   KAILIFNNHGKPRLSKFYQPY---SEDTQQQII 32


>BT009833-1|AAP88835.1|  193|Homo sapiens adaptor-related protein
           complex 3, sigma 1 subunit protein.
          Length = 193

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -3

Query: 555 KPSLDFTNHSRPKLAKSVQPYSSFSETNEQQFI 457
           K  L F NH +P+L+K  QPY   SE  +QQ I
Sbjct: 3   KAILIFNNHGKPRLSKFYQPY---SEDTQQQII 32


>BC000804-1|AAH00804.1|  193|Homo sapiens adaptor-related protein
           complex 3, sigma 1 subunit protein.
          Length = 193

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -3

Query: 555 KPSLDFTNHSRPKLAKSVQPYSSFSETNEQQFI 457
           K  L F NH +P+L+K  QPY   SE  +QQ I
Sbjct: 3   KAILIFNNHGKPRLSKFYQPY---SEDTQQQII 32


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,430,765
Number of Sequences: 237096
Number of extensions: 1527584
Number of successful extensions: 2678
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2678
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)