Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0097
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    25   0.98 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.3  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 244 FFVFIKNYNQNFCFWINLNSFFLNTICLAF 155
           +FV   N NQ    WI  NSF + T+   F
Sbjct: 19  YFVSAYNLNQEDSNWIITNSFIIFTMQTGF 48


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 223 YNQNFCFWINLNSFFLNTICLAFTAFINLSIINVTRNGYR 104
           YN +F  + +L+SF++  I + F  +   +I    RN  R
Sbjct: 339 YNTDFIIYSSLSSFYIPCIIMVFLYY---NIFKALRNRAR 375


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,184
Number of Sequences: 438
Number of extensions: 3293
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)