Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0096
         (632 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9NYP3 Cluster: Protein downstream neighbor of Son; n=2...    34   2.5  
UniRef50_Q9Y4B6 Cluster: Protein VPRBP; n=26; Fungi/Metazoa grou...    33   7.5  

>UniRef50_Q9NYP3 Cluster: Protein downstream neighbor of Son; n=27;
           Tetrapoda|Rep: Protein downstream neighbor of Son - Homo
           sapiens (Human)
          Length = 566

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 90  TGPILPNDFHFQTIILSSLSQFYFSLILFIHTP 188
           TGPI+P+  H  T++L S     FS +L+ H P
Sbjct: 473 TGPIMPHSLHSLTMLLKSSQSGSFSAVLYPHEP 505


>UniRef50_Q9Y4B6 Cluster: Protein VPRBP; n=26; Fungi/Metazoa
           group|Rep: Protein VPRBP - Homo sapiens (Human)
          Length = 1507

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
 Frame = -1

Query: 464 TTRITCICLLIYYQIML*IKIE--KQNLLRKEGTCVFH----YYSCSISH 333
           T + TC+ L  Y++  L IK+E  KQ+L R EG  + H    Y +CS +H
Sbjct: 516 TGKHTCMALRKYFEAHLAIKLEQVKQSLQRTEGGILVHPQPPYKACSYTH 565


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,134,338
Number of Sequences: 1657284
Number of extensions: 9870621
Number of successful extensions: 17453
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17453
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)