Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0096
         (632 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0685 + 30891289-30891810,30892740-30892915,30893379-308934...    31   0.76 
01_01_1222 + 9877607-9877691,9879235-9879390,9880070-9880148,988...    27   9.4  

>02_05_0685 +
           30891289-30891810,30892740-30892915,30893379-30893492,
           30893846-30893954,30894038-30894124,30895137-30895736,
           30895823-30896101,30896808-30896897,30897151-30897507,
           30897924-30898160,30898733-30898953,30899856-30899955,
           30900042-30900188,30900287-30900385
          Length = 1045

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +1

Query: 25  SETSFSNKKFCNIVSLRITNDRPVPSCQMIFISKQ*YYRLYH 150
           S +SF+++K  +++ L++ ND PV   Q +    Q YY  Y+
Sbjct: 647 SLSSFADQKIVSLILLQVENDSPVAGKQKVDNEGQQYYPSYY 688


>01_01_1222 +
           9877607-9877691,9879235-9879390,9880070-9880148,
           9881471-9881711,9881794-9881868,9881960-9882094,
           9882634-9882821,9882915-9882983,9883060-9883150,
           9883262-9883396,9883675-9883740,9883823-9883935,
           9884020-9884110
          Length = 507

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = -2

Query: 613 NYLQRELRTYAYTNLLSNYSLYKMTRVPTCSQIFNVPL--CGAKACLPFSYLQRELHAYA 440
           NY++  L+      LL     Y   R+P  SQ+  V L  C      P  +L  EL+ + 
Sbjct: 387 NYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQVIPVQLKSCALNRADPMLFLTEELN-FP 445

Query: 439 Y*FIIKLCFKLKLRNRI 389
              + +L   L L NRI
Sbjct: 446 EKDVEQLLVSLILDNRI 462


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,046,259
Number of Sequences: 37544
Number of extensions: 246152
Number of successful extensions: 366
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)