Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0096
         (632 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC048266-1|AAH48266.1|  566|Homo sapiens downstream neighbor of ...    34   0.36 
AK074964-1|BAC11320.1|  566|Homo sapiens protein ( Homo sapiens ...    34   0.36 
AK001274-1|BAA91594.1|  326|Homo sapiens protein ( Homo sapiens ...    34   0.36 
AF232673-1|AAF72947.1|  462|Homo sapiens B17 long form protein.        34   0.36 
BC110371-1|AAI10372.1| 1506|Homo sapiens VPRBP protein protein.        33   1.1  
AF061935-1|AAG27134.1| 1401|Homo sapiens HIV-1 Vpr-binding prote...    33   1.1  
AB018343-1|BAA34520.2| 1521|Homo sapiens KIAA0800 protein protein.     33   1.1  

>BC048266-1|AAH48266.1|  566|Homo sapiens downstream neighbor of SON
           protein.
          Length = 566

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 90  TGPILPNDFHFQTIILSSLSQFYFSLILFIHTP 188
           TGPI+P+  H  T++L S     FS +L+ H P
Sbjct: 473 TGPIMPHSLHSLTMLLKSSQSGSFSAVLYPHEP 505


>AK074964-1|BAC11320.1|  566|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90483 fis, clone NT2RP3002983. ).
          Length = 566

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 90  TGPILPNDFHFQTIILSSLSQFYFSLILFIHTP 188
           TGPI+P+  H  T++L S     FS +L+ H P
Sbjct: 473 TGPIMPHSLHSLTMLLKSSQSGSFSAVLYPHEP 505


>AK001274-1|BAA91594.1|  326|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10412 fis, clone NT2RP1000040. ).
          Length = 326

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 90  TGPILPNDFHFQTIILSSLSQFYFSLILFIHTP 188
           TGPI+P+  H  T++L S     FS +L+ H P
Sbjct: 233 TGPIMPHSLHSLTMLLKSSQSGSFSAVLYPHEP 265


>AF232673-1|AAF72947.1|  462|Homo sapiens B17 long form protein.
          Length = 462

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 90  TGPILPNDFHFQTIILSSLSQFYFSLILFIHTP 188
           TGPI+P+  H  T++L S     FS +L+ H P
Sbjct: 369 TGPIMPHSLHSLTMLLKSSQSGSFSAVLYPHEP 401


>BC110371-1|AAI10372.1| 1506|Homo sapiens VPRBP protein protein.
          Length = 1506

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
 Frame = -1

Query: 464 TTRITCICLLIYYQIML*IKIE--KQNLLRKEGTCVFH----YYSCSISH 333
           T + TC+ L  Y++  L IK+E  KQ+L R EG  + H    Y +CS +H
Sbjct: 515 TGKHTCMALRKYFEAHLAIKLEQVKQSLQRTEGGILVHPQPPYKACSYTH 564


>AF061935-1|AAG27134.1| 1401|Homo sapiens HIV-1 Vpr-binding protein
           protein.
          Length = 1401

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
 Frame = -1

Query: 464 TTRITCICLLIYYQIML*IKIE--KQNLLRKEGTCVFH----YYSCSISH 333
           T + TC+ L  Y++  L IK+E  KQ+L R EG  + H    Y +CS +H
Sbjct: 410 TGKHTCMALRKYFEAHLAIKLEQVKQSLQRTEGGILVHPQPPYKACSYTH 459


>AB018343-1|BAA34520.2| 1521|Homo sapiens KIAA0800 protein protein.
          Length = 1521

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
 Frame = -1

Query: 464 TTRITCICLLIYYQIML*IKIE--KQNLLRKEGTCVFH----YYSCSISH 333
           T + TC+ L  Y++  L IK+E  KQ+L R EG  + H    Y +CS +H
Sbjct: 530 TGKHTCMALRKYFEAHLAIKLEQVKQSLQRTEGGILVHPQPPYKACSYTH 579


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,922,330
Number of Sequences: 237096
Number of extensions: 1404749
Number of successful extensions: 1858
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1858
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)